Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1903 |
Symbol | |
ID | 5747460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2105586 |
End bp | 2106245 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641296981 |
Product | Smr protein/MutS2 |
Protein accession | YP_001562928 |
Protein GI | 160897346 |
COG category | [S] Function unknown |
COG ID | [COG2840] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00344455 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTTTGA AAGCCACCAG CCTGCAGGAC CTCGCGCCAG TGCGCCGCGC ACTGGCCGAA GCCGCCGCCC AAGAGGCCCT GCTCCAGCAG CAGCGCGCCG AGGCGGCGCG CCGCCTCCTG GCCGAGCAAA AGCTGTTCGA GAACACCGTG GGCCCGGTGC ATGCGCTCAA GTCCGCGCAC GCCCGCCACC TCCACGCCCC CGAGCCCCCC GAGCCGCTGC CCCTGCAGCT GGAGCTGGAC GAGCAGCGCG TGCTGCAGGA GGCCATGAGC GACGAGTTCG ACGTCAGCAC CCTGCTGGAC ACCGACGACC AGCTCAGCTT CCGGCGCCCC GGCATCGGCC TGGACGTGAC GCACAAGCTG CGCGCCGGGC AGTGGAGCAT CCAGCGCCAG CTGGACCTGC ACGGCCTGCG CGTGGACGAG GCGCGCGAGG CGCTGGGCCA GTTCATCCGC CTGTCGCACC GCACCGGCAT ACGCTGCGTG CGCGTGGTGC ACGGCAAGGG CCTGGGCTCG CCCGGCAAGA CCCCCGTGCT CAAGGGCCGC GTGCTGCGCT GGCTGGTGCA GAAAAAGGAA GTGCTGGCCT TTGTGCAGGC CCGCCCGGCC GAAGGTGGCG CGGGCGCCCT GGTCGTCCTG CTGCAGCCGG GCAGGCGCCA GCTGTACTGA
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Protein sequence | MTLKATSLQD LAPVRRALAE AAAQEALLQQ QRAEAARRLL AEQKLFENTV GPVHALKSAH ARHLHAPEPP EPLPLQLELD EQRVLQEAMS DEFDVSTLLD TDDQLSFRRP GIGLDVTHKL RAGQWSIQRQ LDLHGLRVDE AREALGQFIR LSHRTGIRCV RVVHGKGLGS PGKTPVLKGR VLRWLVQKKE VLAFVQARPA EGGAGALVVL LQPGRRQLY
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