Gene Daci_1882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1882 
Symbol 
ID5747439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2082352 
End bp2083683 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content70% 
IMG OID641296960 
ProductMmgE/PrpD family protein 
Protein accessionYP_001562907 
Protein GI160897325 
COG category[R] General function prediction only 
COG ID[COG2079] Uncharacterized protein involved in propionate catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATGTCA GCGAAACCCT GGGCCAGTTC GGCGCCCGAT TCCAGCAAGC GCCTGTCGAG 
GCCAGCGTTC TCCACCATGC CCGACGCGCC GTGGTGGACT GGTATGCCGC GCTGATCGCC
GGCTACGGCA TGGACCCCAC GCCCCGGCTG GAACGCGCCA TGGCCGAAGA CCTGGACCGG
GGCGGCGCAC GGCTGGCCCT GGGCCGGCGC GCCACCGCCC GGGCGGCGGC GCTGATCAAC
GGTACGGCCT CGCATGCAGC CGAGGTGGAC GACATCTTCA AGCACGCCAT CTACCACCCG
GGCGCACCCA CCATCTCGGC GGCCCTGGCG GTGGCGCAGC AGCAAAGGGC CAGCGGCCTG
CAATTGCTGC AGGCCGTGAT TGCGGGCTAC GAGATCTCCA CCCGCATAGG CCAGGTACTG
GGACGTGCGC ACTACCGCTA CTGGCACAAC ACGGGCACGG TGGGCAGCTT TGGCGCTGCT
GCGGCGGCGG CCTGCCTGCT GGGGCTGGAT GCGCAGCGCT TCACGCATGC GCTGTGCACG
GCGGCCACCT TTGCGGCAGG ACTGCAGCAG GCCTTCCAGA TGGACTCCAT GTCCAAACCT
CTGCACGCCG GGCGCGCGGC CGAGGCCGGC GTCGCCGCAG CACTGATGGC CGACCAGGGC
GTGACGGGAT CGCTCGATGT CTTCGAAGGC GCCATGGGCC TGGGCACGGC CATGAGCGAT
GCGCCTGATT GGCAGCCCGT GCTGGCGGAC CTGGGCCAGG TCTTCAACAC CGCTGCCATG
ACGTTCAAGA ACCACGCCTG CTGCGGCCAC ACCTTCGCGC CCATCGACGG CGCCCTGCAT
CTGCAGCAGG TGCATGGCTT CGCTGCCGAC GATATCGCAC AGCTGCAGGT TGCCACCTAT
GGCCCGGCCC TCACCGTGGC CGGCAACCGC GCACCACGCA CGGCCGCCGA GGCACGCTTC
AGCATTCCCT ACGTGGTGGC CCATGCGCTG CGCCGGGGCA GCGTGCGGCT GGCGGCCTTC
GACGAGGCTC ATCTTGGCGA TGCACAGACC CGCGCGCTGA TGCAGCGCAT CACGCTGGAA
CGGCACCCCG AGCTGGACCA CCAGTTCCCG GCGCAACGCG CCGCGCAGGT CCGCATCACC
CTGCGCGACG GCAGTGTGCA TTCCTGGCTG CAGCCCACGC GCAAGGGCGA TCCCGACATG
CCGCTCAGCG ACGCCGATCT GCAGGCCAAG CTGGCCGAGC TGGCCGGACC CGTGCTGGGC
GCGGACCGGC TGCGGCAGGT GACCGAGCGG CTGTGGACGC TGGACCAGGC CGCAGATCTC
GATGGCTTGT GA
 
Protein sequence
MYVSETLGQF GARFQQAPVE ASVLHHARRA VVDWYAALIA GYGMDPTPRL ERAMAEDLDR 
GGARLALGRR ATARAAALIN GTASHAAEVD DIFKHAIYHP GAPTISAALA VAQQQRASGL
QLLQAVIAGY EISTRIGQVL GRAHYRYWHN TGTVGSFGAA AAAACLLGLD AQRFTHALCT
AATFAAGLQQ AFQMDSMSKP LHAGRAAEAG VAAALMADQG VTGSLDVFEG AMGLGTAMSD
APDWQPVLAD LGQVFNTAAM TFKNHACCGH TFAPIDGALH LQQVHGFAAD DIAQLQVATY
GPALTVAGNR APRTAAEARF SIPYVVAHAL RRGSVRLAAF DEAHLGDAQT RALMQRITLE
RHPELDHQFP AQRAAQVRIT LRDGSVHSWL QPTRKGDPDM PLSDADLQAK LAELAGPVLG
ADRLRQVTER LWTLDQAADL DGL