| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1871 |
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| Symbol | |
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| ID | 5747428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2068780 |
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| End bp | 2071308 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296949 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001562896 |
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| Protein GI | 160897314 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.464371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAC GAGCTGCCGC GCATCATTTT CTCGGAGCCC GGCGCAGTGC CCACATCAAG
GCACTGGTGC TGACCTTTGC ACTGTGCGTG CTCGCCGGAC TGGTGCTCTT CGTCTGGAGC
CAGCTGCATG CCGATGCGGA CCAGAGCAAG TCCCAGGCCG CGCTGCTGGC CCGCGTGCTG
GAGGACCAGA CGGCCAAGAC CTTCGAGAAC ACCGAAATGG CCCTGGCCAG CCTGGCGCAC
AACCCGGCCA TCGTGGCCGC AGGCAGTGGG CGCGGCGCGC GCGAGGCCGC CATGGCCCTG
CTGATCGCCC AGTTGCCCTA CCTGCGCAGC ATGGCGCTGA TCGACGACAA GGGCCTCATC
CTGGCCAGCA CCCAGGCCGG GGAGGCCGGC CAGCAGATCG ACACGCAGGA TCTGCTGCAC
GACAAGGCGG CCGTCCTCAT CCCCGGCAAG CCCCAGTTGG GCCGGCTGGT GCCCGGCCGC
AGCCTGTCGT CGCTGGCGCC ACGGGCGCAT CCGACGCCGC GCGGCGTGTC CTTTCTGCCG
CAGTTGCTGA CCTTCCACCA GGACAACGGC ATGCCCGCCG TGCTGGTGGC CCTGATCAAT
CCCGACGCCG TGGCCAACTT CTACCAGTCC ACGCTGGAGA CCCTCAGCTA CGAGGCCGTG
CTGCTGACCT ATGACGGCCG GCCCCTGGCC AGCACCAATG AGGGCACGGG CGTGCAGACG
GCCGCCGCGC TGCAGACGCC GCTGTTCCAG GAATGGCTGC CGCACAGCGA ATTCGGCTCC
TACATCGGCG CGGGCATGCT GGGGCGCCAC CAGATCGTGT CGTTCCGCAC CGTGCGCAAC
TGGCCGCTGC TGCTGGTGGT GGAAGAGCCC TACGCGGCCA TGGTGGCGCG CTGGCGGGAC
AACGCCTTTG CCTTCTTCGT GGCCGGCGTG GCCCTGCTGG GCCTGGTGCT GGGACTGAGC
TGGTCGGTGC TCAAGACCCG CAGGGTCCAG AAGTCGGCAC TGCAGGCCAT GGAGCAGGCA
CAGGCGCGCC TGGCCCGCAG CGAGCATGAG ATGGCCGTGC TTATGCGCAG CGTGCAGGAG
CTGATCTTTC GCACCGACAG CCAGGGACTG CTGACCTTCG TGAACGCGCG CTGGGAGCAA
CTGACCGGCC AGCCCAGCGC CGAGGCCGTG GGCCAGCCGC TGGAGAACAT CGTGGACGGC
TCGTACCTGG CGCAGATCCA GGCCCTGCTC GATCCCCTGG CCCGGCTGGC ACCGCGCAAC
TGCCAGGCCA TGTTCCGCCT GCCGGGCAAC CGGGAGATGC TCTGCGACAT CGCCGTGGTT
CCCCTGCTGC GCGACGGCCA GCTGGTGGGC TTTGCCGGCA GCGCCGTGGA CGTGACCGCC
CGCTGGAAGG CCCAGCAGGA ACTGCAGACC CAGCTGGCCT TCCAGCATCT GCTGTTCGAG
ACCACGCCCC TGCCCATGCT GGTCACCGAC GCGGACCAGC GCGTGGCCCT GGTCAACAAG
GCCTGGGAGG ACTTCTTCGG CCGGGGCCGC TACGCCGTGC TCGGCCACGA GATAAAGGGC
CTGCACGCGC GCGACGATGC CCTGCTGCAG ATGCGCAGCA ACCAGGTCGT GATGCGCTCG
GGCCAGCGCA TGATGGTGGA GGCCCGGCTG CCCCATGTGG ACGGCAGCTA CCGCGATGTG
CAGATCTCCA AGGCCGCGGT GAAGAACGCC CAGGGCCGGA TCACCGGCGT GCTCAGCATT
TTTGTGGACG TGAGCGAATT CCGCGCAGCC GAGCATGCCA CCCGCGAAGC CCGCGACGCG
GCCGAAGAGG CCTTCCGCGT GAAATCGGAA TTCGTGGCCA ACATGAGCCA TGAGTTGCGC
ACCCCGCTGC AGTCCATCAT GGGCTTTGCC GAGCTCGGCG GCCTGCGCTC GCGCGGCAAT
CCCGCCATGG CCGACATGTT CAACGACATC CACGAGGCGG GCATACGCAT GCTGGCCCTG
GTCAACGACC TGCTGGACGT GGCCAAGCTG GAAAGCGCCG TGGGCACCAT CCACGTGGAG
CGCACCGACC TCAGGAGCCT GATCCGGCCC GTGGTGCGCG AGCTCGAGCC GCAGCAGCAG
CAAAAGCTGA TCGACCTGCG GCTGGAGCTC GACGACACGC CGCTGATCGC CAAGGCCGAC
CCCGTGCGCT TCCAGCAGGT GGTGCGCAAC GTGCTGGCCA ATGCCATCAA GTTCTCGCCC
ATTGGCGGGC GCATCGATGT GCAGGGCCGC ATCGATGAGC AGGGCGATAT CTGCATCGCC
GTCTCCGACC AGGGGCCGGG CATTCCGCCG CAGGAACTGG ACAAGATCTT CCAGCCCTTC
GTGCAGTCCA GCAAAACCCG CAACGGCTCG GGCGGCACCG GCCTGGGCCT GGCCATCTGT
CGCAAGATCA TCGACGCCAT GGACGGCACC ATCGCCGCCA GCAACCGCTC CGAAGGCGGG
TCGCTGTTTC GCATCACCCT GCCCTGCCGC ACCGGCGCCT CGGAGACGCG GCCGGCGGAG
TTGCTGTAG
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| Protein sequence | MSERAAAHHF LGARRSAHIK ALVLTFALCV LAGLVLFVWS QLHADADQSK SQAALLARVL
EDQTAKTFEN TEMALASLAH NPAIVAAGSG RGAREAAMAL LIAQLPYLRS MALIDDKGLI
LASTQAGEAG QQIDTQDLLH DKAAVLIPGK PQLGRLVPGR SLSSLAPRAH PTPRGVSFLP
QLLTFHQDNG MPAVLVALIN PDAVANFYQS TLETLSYEAV LLTYDGRPLA STNEGTGVQT
AAALQTPLFQ EWLPHSEFGS YIGAGMLGRH QIVSFRTVRN WPLLLVVEEP YAAMVARWRD
NAFAFFVAGV ALLGLVLGLS WSVLKTRRVQ KSALQAMEQA QARLARSEHE MAVLMRSVQE
LIFRTDSQGL LTFVNARWEQ LTGQPSAEAV GQPLENIVDG SYLAQIQALL DPLARLAPRN
CQAMFRLPGN REMLCDIAVV PLLRDGQLVG FAGSAVDVTA RWKAQQELQT QLAFQHLLFE
TTPLPMLVTD ADQRVALVNK AWEDFFGRGR YAVLGHEIKG LHARDDALLQ MRSNQVVMRS
GQRMMVEARL PHVDGSYRDV QISKAAVKNA QGRITGVLSI FVDVSEFRAA EHATREARDA
AEEAFRVKSE FVANMSHELR TPLQSIMGFA ELGGLRSRGN PAMADMFNDI HEAGIRMLAL
VNDLLDVAKL ESAVGTIHVE RTDLRSLIRP VVRELEPQQQ QKLIDLRLEL DDTPLIAKAD
PVRFQQVVRN VLANAIKFSP IGGRIDVQGR IDEQGDICIA VSDQGPGIPP QELDKIFQPF
VQSSKTRNGS GGTGLGLAIC RKIIDAMDGT IAASNRSEGG SLFRITLPCR TGASETRPAE
LL
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