| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1870 |
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| Symbol | |
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| ID | 5747427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2067418 |
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| End bp | 2068605 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296948 |
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| Product | muconate and chloromuconate cycloisomerase |
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| Protein accession | YP_001562895 |
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| Protein GI | 160897313 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR02534] muconate and chloromuconate cycloisomerases |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGACC GTTTCCTGAT CGAGCGCATC GAGGCGCGGA TCCTCGACAT TCCCACCATC
CGTCCGCACA AGCTGTCGTT CGGCTCCATC AGCCGGCAAA GCCCGGTGAT CGTGCAGCTG
TGGCTGCGCA ATGGCGCCAC GGGCTTTGGC GAGGCCGCCA CCATCGGCGG CCCGTCGTGG
AACGAGGAAT CGCCCGAGAG CATCCACCAC GCCATCACCA ACCACCTGGC GCCCAGCCTG
ATCGGCCAGG ACGGGGCGCG CTTCGAGGCC TGCCTCTCGC GCATGGACCT GGCCTGCAAG
GGCAATGCCT TTGCCAAGAG CGCCGTGGAG ATCGCGCTGA TGGACGCCGT GGCCCGCAGC
CTGCAGTTGC CGCTGTGGCA ATTGCTGGGC GGCAAGCAGC GCGACAGCCT GCCCCTGGCC
TGGACGCTGG CCAGCGGCGA CATCGAGCGC GACCTGGCCG AGGCCCATCT GCGCCTGGAA
CAAAAGCGCC ACCGCATCTT CAAGATGAAG ATCGGCGCGC GCACGCCTGA GGCCGATGTG
GCCCATGTGA GCGAGATCGC GCGCGGCCTG CAGGGACGCG CCACGCTGAC CGTGGACGTC
AACCAGGCCT GGGACGGCGC CACGGCGCGG CGCTTTCTGC CGCAATTGAT CGATGCCGGC
GTGACCCTGA TCGAGCAGCC CGTGGCCGGC TGGAACGTGC CCGCGCTGCG CGAGCTGACG
GCCACGCTGC AGGGCGCCCT GGTCATGGCC GACGAGAGCG TGTGCACGCC CTACGACGCC
ATGCGCCTGG CGCGCGAGCA GGCCAGCCAT GTGTTCTCGC TCAAGGTGGC CAAGCACGGC
GGCCTGCTGC GCACGCGCAA GGTGGCGGCC ATTGCCCAGG CGGCCGACAT CGGCTGGTAC
GGCGGCACCA TGCTGGAGAC CTCGATCGGT TCGGCCGCCT CGGCCCATGT CTTTGCCACG
CTGGGCGGGC AGCACTACAA CTGCGAGCTG TTCGGCCCCC AGCTGCTGGT GGACGACATC
GTCACCGAGC GCATGGCCAT CCGCGACTTC GAGCTGCAAC TGCCCGACGG GCCCGGACTG
GGCGTGGAGA TCGACCTGCA GCAACTCGCG CGTTTCGACC GCGCGCTGGC CGGCAGCCAG
CCGCAGCACT TCGACATGGG GCAGGCCCGG ACCGGGGCTG CGACCTGA
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| Protein sequence | MQDRFLIERI EARILDIPTI RPHKLSFGSI SRQSPVIVQL WLRNGATGFG EAATIGGPSW
NEESPESIHH AITNHLAPSL IGQDGARFEA CLSRMDLACK GNAFAKSAVE IALMDAVARS
LQLPLWQLLG GKQRDSLPLA WTLASGDIER DLAEAHLRLE QKRHRIFKMK IGARTPEADV
AHVSEIARGL QGRATLTVDV NQAWDGATAR RFLPQLIDAG VTLIEQPVAG WNVPALRELT
ATLQGALVMA DESVCTPYDA MRLAREQASH VFSLKVAKHG GLLRTRKVAA IAQAADIGWY
GGTMLETSIG SAASAHVFAT LGGQHYNCEL FGPQLLVDDI VTERMAIRDF ELQLPDGPGL
GVEIDLQQLA RFDRALAGSQ PQHFDMGQAR TGAAT
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