Gene Daci_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1795 
Symbol 
ID5747353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1993550 
End bp1994383 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content66% 
IMG OID641296875 
Productaldolase II superfamily protein 
Protein accessionYP_001562822 
Protein GI160897240 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.185946 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATT TCCCCACAAG CCACTGCACA ACCCATCTCA AGACCCACCT CAGAATCCAC 
CCCACGAGCC ACACCATGAA TTGCTCCATG CACCCTGATG AGCGGGCCGC CCGCATCGAA
CTGGCCGCCT GCTACCGCGT CTTCGCCATG CTGGGCTGGG ACGAACTGAT CTACAACCAC
ATCACGGTGC GCCTGCCCGA CAGCGTGACG GGCGGTGAAA AGCAGTTCCT GATCAACCCC
TTCGGCCTGC ACTACGAAGA GGTCACGGCC AGCAACCTGG TGCGCATCAA CGTGCGCGGC
GAGGTGCTGG ACGGCTCGCG GCATCCGGTG AATCCGGCCG GCTTCGTGGT GCATGCGGCC
ATCCACGACG GACTGCCGGG CGCGCACTGC GTGATGCACA CGCACACCAC CTCGGGCATG
GGCGTGGCCT GCCTGGAGCA GGGCCTGTCG CAAAGCAACT TCTACAGCGC CCAGCTGCAC
GGCATGGTGG CCTACCATGA CTTCGAGGGC ATCACCATCC ATGCCGACGA AGGGCCGCGC
CTGCTGGCCA GCATCGGCCG CCGCAAGGCC GTGATCCTGC GCAACCATGG CCTGCTCAGC
TGGGGCAGCG ACCTGCCCCA GGCCTTCGTG GTGCTGTGGA CGCTGCAGCG CGCCTGCGAC
GTGCAGATGG CCACCCTGTC CATGGGCGCG CCGCGCATGG TCTCCGACGC CATGGCCCAG
CGCTGCAACG AGGACTCGCT GACCTTCAAC GCCAGCCACG GCGGTGCCCG CGATGTGTTC
GACCATCTGG TGCGCCGCGT GAACCGGCGC GACAACAGCT ATCTCGATCT TTGA
 
Protein sequence
MPDFPTSHCT THLKTHLRIH PTSHTMNCSM HPDERAARIE LAACYRVFAM LGWDELIYNH 
ITVRLPDSVT GGEKQFLINP FGLHYEEVTA SNLVRINVRG EVLDGSRHPV NPAGFVVHAA
IHDGLPGAHC VMHTHTTSGM GVACLEQGLS QSNFYSAQLH GMVAYHDFEG ITIHADEGPR
LLASIGRRKA VILRNHGLLS WGSDLPQAFV VLWTLQRACD VQMATLSMGA PRMVSDAMAQ
RCNEDSLTFN ASHGGARDVF DHLVRRVNRR DNSYLDL