Gene Daci_1786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1786 
Symbol 
ID5747344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1985260 
End bp1985946 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID641296866 
Productflavoprotein oxygenase DIM6/NTAB family-like protein 
Protein accessionYP_001562813 
Protein GI160897231 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.60124 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.96149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTG AAATGCAATC GCTCAACAGC GAGCAGCGCA GCAACATCCT GCACTCCCTG 
GTTCTGCCCC GTCCCATCGC CTGGATCAGC TCGGTGGACG GGGACGGCAC GGTCAACGTC
GCGCCGTTTT CCTTCTTCAA CGCCATGTCG GGCGATCCGC CGCTGCTGTG CGTGTGCATA
GGCTCGCGCC AGGGCGTGCT CAAGGACACG GCGCGCAACA TCGCGGCCAC GGGCGAGTTC
GTGGTGAACC TGGTGTCCGA GCCGCTGGCG CGCCGCATGG CGGTGACGGC CATAGAGTTC
GGCGCGCAGG TGGACGAGTC GGCCCAGGCC GGCCTGGTCC TGGGCGATGC ACGGCGGGTG
AAGGCGCCGC GCATCGTGGA CAGCCCTGCG TCCTTCGAGT GCCGCGTGCG CCAGATCATC
GATATCGACG GCGTGCGCAG CCTGGTGCTG GCCGACGTGC TGGCCGCCCA TGTCATGGAT
GCGGCCGTGG TCGATGGCGA GCTCATGTAC TTCGACCCCG CGCCCATGGA GCTGATCGCG
CGGCTGCAGA ACCCCGGCTG GTATGGCCGC GTGGGCGATG CCTTCCAGAT GCCCACGCCC
TCGGTGGCGC AGTGGGATGC CATGCAGCGC CAGGGCGTGT CCGACAGCTA CCTGGCCTGG
GCCGACGATG GCGCCGCCGC GCGCTGA
 
Protein sequence
MYFEMQSLNS EQRSNILHSL VLPRPIAWIS SVDGDGTVNV APFSFFNAMS GDPPLLCVCI 
GSRQGVLKDT ARNIAATGEF VVNLVSEPLA RRMAVTAIEF GAQVDESAQA GLVLGDARRV
KAPRIVDSPA SFECRVRQII DIDGVRSLVL ADVLAAHVMD AAVVDGELMY FDPAPMELIA
RLQNPGWYGR VGDAFQMPTP SVAQWDAMQR QGVSDSYLAW ADDGAAAR