Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1780 |
Symbol | |
ID | 5747338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1980261 |
End bp | 1980923 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296860 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001562807 |
Protein GI | 160897225 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2011] ABC-type metal ion transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.290196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGCTGA ATCTGTCCAT TCCCATTGAG CGCTACGGCA ACGCGCTGGC CGACACGCTG ATGATGGTCG GCGTCTCGGG CGGCATCGCG CTGGCGGCGG GCATTCCGCT GGCGGTGCTG CTCATCGTCA CCGCGCCCGG CGGCTTCCTG GCCTCGCCGC GCACGCACCG TGCGCTGGGC AGCGTGATCA ACGGCTTCCG TGCCACGCCA TTCATCGTGC TGCTGGTGGC GCTGATCCCG TTCACGCGGC TGGTGACGGG CACCACCATC GGCGTGTGGG CGGCCATCGT GCCGCTGGCC ATCAGCGCCA CGCCGTTCTT CGCGCGCATC GTCGAGGTCA GCCTGCGCGA GGTCGATCCC GGCCTCATCG AAGCCGCCCA GGCCATGGGC TGCCGCAAGT GGGACATCGT GCGCCACGTC TACCTGCCCG AGGCCCTGCC CGGCATCGTG GGCGGCTTCA CCATCACCCT GGTGGCGCTG ATCAGTTCCT CGGCCATGGC CGGCGCCGTG GGCGCGGGCG GCCTGGGCGA CCTGGCCATC CGCTACGGCT ACCAGCGCTT CGACACCCAG GTGATGCTGC TGGTGATTGC CGTGCTGATC GCGCTGGTCA CCGTGGTCCA GGTGCTGGGC GACCGCTACG TGCGCCGGCT GCGCAGCCGC TGA
|
Protein sequence | MSLNLSIPIE RYGNALADTL MMVGVSGGIA LAAGIPLAVL LIVTAPGGFL ASPRTHRALG SVINGFRATP FIVLLVALIP FTRLVTGTTI GVWAAIVPLA ISATPFFARI VEVSLREVDP GLIEAAQAMG CRKWDIVRHV YLPEALPGIV GGFTITLVAL ISSSAMAGAV GAGGLGDLAI RYGYQRFDTQ VMLLVIAVLI ALVTVVQVLG DRYVRRLRSR
|
| |