| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1725 |
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| Symbol | |
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| ID | 5747283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1919523 |
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| End bp | 1920569 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641296806 |
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| Product | porin |
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| Protein accession | YP_001562753 |
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| Protein GI | 160897171 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.340698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTCA AACATATAGT TGCGTTGTCG CTGGCAGGCA TTGCTGCAAG TGCAAGTGCT
CAATCCTCCG TCACCCTGTT TGGTATCGTT GACGTGAACA CGCGTTACGT GAACAACAGC
AATCTTCCAA GCAACCTGAC GATGAACAAC AGCGGTCTGT CGTCCGGCCG CTTCGGTTTT
CGTGGCGTAG AAGATCTTGG CGGAGGCCTG AAAGCTGGTT TCTGGCTTGA GTCTGACGTT
AATGCCGATA CCGGCACCTT CAGCTCGACG GGAAAATTCT TCCAGCGTCG CTCGACGATC
AGCCTGATGG GCAATTTTGG TGAAGTTCGC CTGGGTCGCG ATTTCTCGCC TGCTTCCATC
AATGCAACCA AGTTCGATCC CTTCAATGTG ATCGGCCTGG CCGGCTCCAA CGTCACCAGC
CGCTTGCCTG GCACAATCGC GTCGTACTAT CGTTACGACA ATGCCATTCA GTACTTCTCT
CCGAAGTTCG CGGGTTTCCA AGCGGAAGCA ATGTACGCTA TGGACGAAGA TCCGCTGACC
AAAGTTGGTC GACACATGGC TGGGCGTTTG GCCTATGACA ACGGTCCTCT GAGCCTCTCG
CTTTCGTACG GTGCAACCGA TGTCACGACT GCTGGTGCCA AGCTCAAGCA ATATGGTGCA
GCAGCGTCGT ACAACTTCGG TGTAGCGACT CTGATGGGTT ATTTCCAGCG TGACGATCTG
CCCTTTGGAA CTTATGGCTC TCGTGCTGCG GGCTCAGAAG ATCGCTGGCA AGTTGGTGTG
ACGGTGCCTG TGGGCAAGGA CTACATCCGA GCTTCTTATG TGCGCACCGA TTCGCGTAAG
GGCCCCGTTG GGTACAACCA GAGCGATGCT AACAAGTACG CAATCGGCTA CGTCCACAAC
ATGTCGACTC GTACGGCTGT CTACGGCACT ATCGCCCGTA TCACGAACAA GGGTGGTGCG
AACTTCAGCT TGGTCGGCGG GGCGTCTGGT CTGGCTGGAG GCGGTAGTTC TACTGGCGCA
GAAGTCGGTA TTCGTCATTC CTTCTAA
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| Protein sequence | MNLKHIVALS LAGIAASASA QSSVTLFGIV DVNTRYVNNS NLPSNLTMNN SGLSSGRFGF
RGVEDLGGGL KAGFWLESDV NADTGTFSST GKFFQRRSTI SLMGNFGEVR LGRDFSPASI
NATKFDPFNV IGLAGSNVTS RLPGTIASYY RYDNAIQYFS PKFAGFQAEA MYAMDEDPLT
KVGRHMAGRL AYDNGPLSLS LSYGATDVTT AGAKLKQYGA AASYNFGVAT LMGYFQRDDL
PFGTYGSRAA GSEDRWQVGV TVPVGKDYIR ASYVRTDSRK GPVGYNQSDA NKYAIGYVHN
MSTRTAVYGT IARITNKGGA NFSLVGGASG LAGGGSSTGA EVGIRHSF
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