| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1694 |
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| Symbol | |
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| ID | 5747252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1883976 |
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| End bp | 1884920 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641296775 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001562722 |
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| Protein GI | 160897140 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACAAACG CCTCCGGCTC CATTGCGACC ACCTTGGCAC CCGCTAACCC CTGGGCCCTG
GTGCCGCCTC TGGGCAATCT GGATGCCTAC ATTTCCGCGG TCAACCGCCT GCCCATGCTC
ACCCTTGAGG AAGAGCAGGA CTACGCCCGC AAGCTCAAAG AACACAGCGA TCTGGACGCC
GCAGGGCGTC TGGTGATGTC CCACCTGCGT CTGGTGGTGT CCATCTCGCG CCAGTATCTG
GGCTACGGCC TGCCGCACGG CGACCTGATC CAGGAAGGCA ACGTGGGCCT GATGAAGGCC
GTCAAGCGCT TCGACCCCGA TCAGAACGTG CGTCTGGTGA GCTACGCCAT GCACTGGATC
AAGGCCGAGA TCCACGAGTA CATCCTCAAG AACTGGCGCA TGGTCAAGGT CGCCACGACC
AAGGCCCAGC GCAAGCTGTT CTTCAACCTG CGCTCCATGA AGCAGGGCCT GAAGTCCGAC
GCCGCCATGG CCGAGGACGG CGCCATGCTG CGTGACACGC TGACCTCGGG CGAGATCGAC
GCCGTAGCAG AGAAGCTCAA CGTCAAGCGC GAAGAAGTCA TGGAGATGGA AACGCGCCTG
GCCGGTGGCG ACGTGCTGCT GGACCCCTCG CCCAGCGACG ATGGCGAGCA GGCCTTCGGC
CCCATCGCCT ACCTGGCCGA TGGCGCCCAC GAACCCACGG CCATGATCGA GTCGCGCCAG
CGCGACCACT TGGCCACCGA CGGCATTGCC ATGGCGCTGG ATTCGCTGGA CGACCGCAGC
CGCCGCATCG TCGAGGAGCG CTGGCTCAAG GTCAACGACG ACGGCTCGGG CGGCATGACG
CTACATGAGC TGGCCGCCGT CTACGGTGTC AGCGCCGAGC GCATCCGCCA GATCGAGGTG
GCTGCCATGA AGAAGATGAA GAAGGCCCTG GCCGAGTTCG CCTGA
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| Protein sequence | MTNASGSIAT TLAPANPWAL VPPLGNLDAY ISAVNRLPML TLEEEQDYAR KLKEHSDLDA
AGRLVMSHLR LVVSISRQYL GYGLPHGDLI QEGNVGLMKA VKRFDPDQNV RLVSYAMHWI
KAEIHEYILK NWRMVKVATT KAQRKLFFNL RSMKQGLKSD AAMAEDGAML RDTLTSGEID
AVAEKLNVKR EEVMEMETRL AGGDVLLDPS PSDDGEQAFG PIAYLADGAH EPTAMIESRQ
RDHLATDGIA MALDSLDDRS RRIVEERWLK VNDDGSGGMT LHELAAVYGV SAERIRQIEV
AAMKKMKKAL AEFA
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