Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1632 |
Symbol | |
ID | 5747189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1826983 |
End bp | 1828272 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641296713 |
Product | HK97 family phage portal protein |
Protein accession | YP_001562661 |
Protein GI | 160897079 |
COG category | [S] Function unknown |
COG ID | [COG4695] Phage-related protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.543468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC CAAAGCAGCG CCGCATCGGG CCAATCCGGT CGGCAATACG CGATTGGCTC GGGGTTCCCG TGTCGATTGG AGATGCAGAA GGGATGGCCG CGATCTTCGC GTCAAGCACA GGGAGTGGCG TCAGCGTCAC CTCTCAGAAC GTCCTGAAGC TGTCGGCCGT CTGGGCTTGT GTCCGGTTGA TCTCGGAAAC CATCGCCACG CTGCCCTTAT CGATGTACGA GCGCACGCCC ACCGGCAAGC GCACGGCATC TGGCCACTGG CTTCACGCGA TCATTCACGA CCAACCGAAT GCGGACAGCA CGGCATCTGT GTTCTGGGAA GCCGTGGTCG CTGCAATGCT GCTGCGTGAT GGTGCGCGGT GTGAAAAGCT CATGATCGGA CCGCGAATTG TGGGTCTGCA GTTTCTCGCG CCCAGTCGGC TCACCTGGTC CCGCAACGCC AACGGCCTGA AGGAGTACAG ATACACCGAT GAAAACGGGC GGCAGCGGGT GATCCCGAGG GATCGCGTTT GGTACATCCC CGGCTTTTCC ATCGATGGTG TGAACGGGGT TTCCGCCATT CGCTACGGCG CCGAGGTCTT TGGCCAAGCC TTGGCTGCTG ACCAGACGGC TGCGAAAACA TTCAAGGACG GGTTGCTGCA GACCTTGTAT TACAAGCTGA AGGACTGGAT GTCGCCAGCG CAGCGCAAGG AATTCAAGGA GAACATACAG GACTCCGTGG AGCGCGGTGA GCGGCCTGTG CTTGAGGGTG GAATCGACGT GGCGGCAGTC GGCCTCAACC CGAAGGATGC GCAGCTGCTG GAGTCGCGCT CTTTCAGCGT TGAAGAAATC TGCCGCTGGT TCCGGGTGCC GCCTTTCATG GTGGGCCACA GCGAGAAGTC CACCAGTTGG GGCACGGGCA TTGAGCAGCA AATGATCGGC TTTCTGACCT TCACCTTGGG GCCGTGGCTG AAGCGGCTGG AGCAGTCCAT CAGCAAGGAC TTGCTGACGC CTGCAGAGCG TCTCAGGTTC TATCCGAAGT TCGCCGTTGA AGGGCTTCTG CGCGCAGACA GCGCGGCGCG CGCGGCCTTC TATGCAGCCA TGGTGAACAA CGGTGTCCTG ACCCGTGATG AGGTGCGGCA GCTGGAGGAT CGTGAGCCCA TGGGGGGCAA CGCGGCGGTT CTCACAGTGC AGTCCGCCAT GACGACCCTG GACGCCATCG GGCAGTCCAC GGATTCACAA CAGGCCCGAG CGGCGCTGCG CGCTTTCCTT GGGTTCGACG AGCAGCCGCA GAAAGGCTAA
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Protein sequence | MKKPKQRRIG PIRSAIRDWL GVPVSIGDAE GMAAIFASST GSGVSVTSQN VLKLSAVWAC VRLISETIAT LPLSMYERTP TGKRTASGHW LHAIIHDQPN ADSTASVFWE AVVAAMLLRD GARCEKLMIG PRIVGLQFLA PSRLTWSRNA NGLKEYRYTD ENGRQRVIPR DRVWYIPGFS IDGVNGVSAI RYGAEVFGQA LAADQTAAKT FKDGLLQTLY YKLKDWMSPA QRKEFKENIQ DSVERGERPV LEGGIDVAAV GLNPKDAQLL ESRSFSVEEI CRWFRVPPFM VGHSEKSTSW GTGIEQQMIG FLTFTLGPWL KRLEQSISKD LLTPAERLRF YPKFAVEGLL RADSAARAAF YAAMVNNGVL TRDEVRQLED REPMGGNAAV LTVQSAMTTL DAIGQSTDSQ QARAALRAFL GFDEQPQKG
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