Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1627 |
Symbol | |
ID | 5747184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1823020 |
End bp | 1823781 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641296708 |
Product | HNH endonuclease |
Protein accession | YP_001562656 |
Protein GI | 160897074 |
COG category | [V] Defense mechanisms |
COG ID | [COG1403] Restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.543288 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGATGGA GTGAGAGCAG CACAGCAAAG AAGCGGTTGC GCGGACGGGC ACTGCAGCAG CGCCGCGAGC AGTACCGGCG ATTCCAGCCG CTGTGCGTGG CGTGCCAGGC CAGGGGCTTC GTACGCGAAT GGGATCAGCT GGACCACATC GTGCCGCTGC ACAAGGGCGG CTCAGACGAC TGGAGCAATC TGCAGGGACT GTGCATCCCC TGCCACAAGG AGAAGACAGA GCGGGAGCTG AGCATGCTGC AGCCCTCGTT CTACCCGACC TGGCTGAAGC CAGCGGCATG CCACCTGACC ATGGTCATCG GGCCGCCGGG CTCTGGCAAG ACCACGTATG CCCAGCAGCA CATGCAGCCC GGCGACCGGC TCATCGACCT TGACCTGCTG ATGTGCGAGG TGTCGGGCCT GCCGATCTAC CAGGTGCCAC CGAACCACCT TGCTGCCGCC GCCCGCCTGC GCAACCGCAG GCTCGGCGCG CTGTCCAGGC CAGGCCACCC GCCCGCCTGG TTCATCACAA CAGCCATAGG CGATGACCGC GCATGGTGGG AGACGAAGCT GGAGCCAGCC CGTGTCGTCG TGATGGAGAC GAGCGAGGCC ACATGCATTT CACGCATCCA CGCGGATGCA AGGCGCCCAG AGCCCGCCAA GCGCGCGGCT CTGGGGATTG TGGGCGACTG GTTTGCAGCA GCTGCAGGCC GGGCCACGAA GAGCGGGAGA CGGCGGACCA TCGGGCTCGA CGGCTTCCCC ATTGAAGACT GA
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Protein sequence | MGWSESSTAK KRLRGRALQQ RREQYRRFQP LCVACQARGF VREWDQLDHI VPLHKGGSDD WSNLQGLCIP CHKEKTEREL SMLQPSFYPT WLKPAACHLT MVIGPPGSGK TTYAQQHMQP GDRLIDLDLL MCEVSGLPIY QVPPNHLAAA ARLRNRRLGA LSRPGHPPAW FITTAIGDDR AWWETKLEPA RVVVMETSEA TCISRIHADA RRPEPAKRAA LGIVGDWFAA AAGRATKSGR RRTIGLDGFP IED
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