| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1592 |
|---|
| Symbol | |
|---|
| ID | 5747149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 1788292 |
|---|
| End bp | 1789608 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641296673 |
|---|
| Product | xanthine permease |
|---|
| Protein accession | YP_001562621 |
|---|
| Protein GI | 160897039 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease
[TIGR03173] xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACAAC TGCTTTACAA GGTGGAAGAC CGTCCGCCAA TGCTCATCAC CACGGTCCTT
CTGTCGCTGC AGCACCTGCT GGCGGCGCTG GGCGGCATCA TCGCCGTGCC CCTGGTCTTC
GGCGGGGCGC TCAAGCTGCC GGCCGACCAG ATCGTGGCGC TGGTGAATGC AGCGCTGCTG
GGTTCGGGCG TGGTCACCAT CGTCCAGTGC AGGGGGGTGG GGCCCGTGGG CATACGGCTG
CCCTGCGTCA TGGGCACAAG CTTCGCCTTC GTGGGCGCGG GCATCAGCGT GGGGCTGGAG
CATGGCGTGG CCGGCATCCT GGGCTCCTCG CTGGTAGGGT CGCTGGTGAT GATCGTGGGC
AGCTACTTCA TGCCCGTGAT CCGCCGCTTC TTTCCGCACA CCGTGACCAG CGTGGTCGTG
ACCATGATCG GCCTGTCGCT GACCCCCGTC GCCGTGGACT GGGCTGCGGG CGGCGTGGGC
CGCAGCGACT ACGGCGCGAT CGGCCACCTG GCCATCGCCG GCTTCGTGCT GGTGCTGGTG
ATCGGCTTCG TGCAGTGGGG CAGGGGCATC GTCTCTGCCT CGGCCGTGGT GCTGGGCATC
GCCTGCGGCT ATGTGCTGTG CCTGGCGCTG GGCCTGATCG ACTTCACCCA GGTGAGCGAG
GCCGCGGTCT TCGCCATCCC GCAGCCGCTG ACCTTCGGCA TGACGTTCCC GGTGGCCGGC
ATCGTCGCCA TGTCCATCGC CTTTCTGGTG ACCATCGTCG AGACCACGGG CACCTTCATG
GCCCTGGGTG CGGCCACGCA GACGCGCATC GACGGCAAGC GCCTGTCCAG CGGCATGCTG
TGCGACGGCG TGGGCTCGGC CTTCGCCGCC GTGATGTCCA GCCCTCCGCT GTCCACCTTC
GCCCAGAACG TGGGCGTGGT CTCGCTGACC GGCGTGGCCA GCCGCCACGT GGTCATGCTG
ACGGGCGTCA TGCTGCTGCT GGCCGGACTC TTTCCCGTGC TGGGCGCACT GGTGGTGACG
ATTCCGCAGC CCGTGCTCGG CGGCGCGGGG CTGATGATGT TTGCCATGAT CATTTCGGCC
GGCATCCGCA TGCTCAGCGG CGCCGAGCAC TCGCGGCGCG CCAGCCTGAT CATCGCGGTC
TCGCTGGGCT GCGGCCTGGC GGTCACGGTG CGCCCGGACC TGCTGTCCCG CATGCCTGCC
TTCGTGCGCG AAGTCTTCGG CTCGGGCATC ACCGTCGGCG CCCTGGTCGC TGTGGGGCTG
AACCTGCTGC TGCCCGGCCG CGAGGTCGAT GCCCATCCCG AGGAAGCCGT GGCCTGA
|
|---|
| Protein sequence | MEQLLYKVED RPPMLITTVL LSLQHLLAAL GGIIAVPLVF GGALKLPADQ IVALVNAALL
GSGVVTIVQC RGVGPVGIRL PCVMGTSFAF VGAGISVGLE HGVAGILGSS LVGSLVMIVG
SYFMPVIRRF FPHTVTSVVV TMIGLSLTPV AVDWAAGGVG RSDYGAIGHL AIAGFVLVLV
IGFVQWGRGI VSASAVVLGI ACGYVLCLAL GLIDFTQVSE AAVFAIPQPL TFGMTFPVAG
IVAMSIAFLV TIVETTGTFM ALGAATQTRI DGKRLSSGML CDGVGSAFAA VMSSPPLSTF
AQNVGVVSLT GVASRHVVML TGVMLLLAGL FPVLGALVVT IPQPVLGGAG LMMFAMIISA
GIRMLSGAEH SRRASLIIAV SLGCGLAVTV RPDLLSRMPA FVREVFGSGI TVGALVAVGL
NLLLPGREVD AHPEEAVA
|
|---|
| |