Gene Daci_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1565 
Symbol 
ID5747122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1757074 
End bp1757613 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content70% 
IMG OID641296646 
Productcytochrome c class I 
Protein accessionYP_001562594 
Protein GI160897012 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.593251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC AACTGCCTCC TGACGCAGAC GACGAGGGCG ACGACGCCCC CCACCGGCCC 
CGCTGGCTGG GCTGGGCGCT CGTGGTCTTC ATGCTGCTGG TGGCGCTGGG TGTCTTCAAC
ATCGGCTGGC GCATCATGCG CGGGCCGGCT GTTGCGCCCG TTGCACCTGC TGCTGGCCTG
CCGGCAGCTG CCGTGACGGC AGCTGCAGAT CCAAATGCAG GTGCAGGCGC AGGTACAGAG
GCCGGTACGG ATGCAGGCCC CCGGCTGCTT GCCGGAAAGG CCCTGGTCGA GGGCAATGAC
TGCCTGCGCT GCCACGGCCT GGTTCGCCAC TACGTGGGCC CGTCCTTCCA GCAGATCGCC
GAGCGCTACC GGGCCCGCGA AGATGCCGCC GACTACCTGG CGCGCAAGAT CCGCGAGGGC
GGGGCCGGCG AATGGGGCCG CGCCATCATG CCGCGCCACC CGCACCTCGA TACGGCGCAA
TCCCTGCAGA TGGCAGCCTG GCTGCTGTCC CTCCCCTCTC CCGAGTCCGG GAAATCCTGA
 
Protein sequence
MAGQLPPDAD DEGDDAPHRP RWLGWALVVF MLLVALGVFN IGWRIMRGPA VAPVAPAAGL 
PAAAVTAAAD PNAGAGAGTE AGTDAGPRLL AGKALVEGND CLRCHGLVRH YVGPSFQQIA
ERYRAREDAA DYLARKIREG GAGEWGRAIM PRHPHLDTAQ SLQMAAWLLS LPSPESGKS