Gene Daci_1548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1548 
Symbol 
ID5747105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1736569 
End bp1737567 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content69% 
IMG OID641296629 
Producthypothetical protein 
Protein accessionYP_001562577 
Protein GI160896995 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGA CAACCCCCTT CAGCCGCTGG CGCCGCCTGG GCCTGCTGGC CCTGCTGGGC 
GCGACGGCCT CGGTCCCTGC GCTGGCGCAG AAGGCCGGCG ACAAATGGCC CGAGCGCCCC
GTGCGCCTGG TGGTGAACTT CGCGCCCGGC GGCGCGGCCG ATGTGCTGGC GCGCGCCATC
ACGCCCACCA TGTCCCAGGT GCTGGGCCAG TCGGTGGTGG TGGACAACAA GCCCGGCGCG
GGCGGCAACA TCGGCATCAG CGAGACCGTG CGCGCGCCCA AGGATGGCTA CACGCTGCTG
CTCAGCTCGG GCGGGGCCAT CACCATCAAC CCGATGATCT ACAGCAAGCT GGCCTTCAAT
CCCGAAAAGG ACTTGACGCC CGTGGCTGCC GTGGCGCGCG TGCATGTGTT CCTGGAGACC
AATCCCGCCG TGCCCGCCAC CAACGTGGCC GACTTCATCA AGCACCTGAA GGCCAACCCC
GGCAAGCTGT CCTACGGCTC GCCGGGCCAG GGCAGCTCGC CGCACCTGGC CGGCGAGATG
TTCAAGCGCA TGGCCGGTGT CGATGCCGTG CACGCCCCCT ACAAGGGCGC GGGCCCGGCG
CTCAGCGACG TGCTCAGCGG GCAGCTGCAG TTCTGGTTCG ACCCGGGTCC GGGCCTCAAG
CAGGTCGAGG CCGGCAAGCT GCGCCTGCTG GCCATCGGCA GCCCGCACCG CTCGCCGCAG
TACCCCAACG TGCCCACGCT GGCCGAAAGC GGCCTGCCTG GCTTTGATGC GGACACGCTG
TTCGGCATCT ACGCGCCCAC GGGCACGCCC GAATCGGTGA TCGAGGCCGT TCGCACTGCC
GTGGCCAAGG CGCTGGAGCA AAAGAACGTC AACGACGTCA TCCTCACCCT GGGCGCCACG
CCCGCGCCGC TGAGCCGCAA GGCCTTCATC GACCACCACG CCACCGAGCG CGAGCGCTTT
GGCGAACTGG TGAAAGCCAT CGGCCTGAAA GTGGACTGA
 
Protein sequence
MHKTTPFSRW RRLGLLALLG ATASVPALAQ KAGDKWPERP VRLVVNFAPG GAADVLARAI 
TPTMSQVLGQ SVVVDNKPGA GGNIGISETV RAPKDGYTLL LSSGGAITIN PMIYSKLAFN
PEKDLTPVAA VARVHVFLET NPAVPATNVA DFIKHLKANP GKLSYGSPGQ GSSPHLAGEM
FKRMAGVDAV HAPYKGAGPA LSDVLSGQLQ FWFDPGPGLK QVEAGKLRLL AIGSPHRSPQ
YPNVPTLAES GLPGFDADTL FGIYAPTGTP ESVIEAVRTA VAKALEQKNV NDVILTLGAT
PAPLSRKAFI DHHATERERF GELVKAIGLK VD