| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1508 |
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| Symbol | |
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| ID | 5747064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1690392 |
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| End bp | 1694303 |
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| Gene Length | 3912 bp |
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| Protein Length | 1303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641296588 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001562537 |
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| Protein GI | 160896955 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATA CGCCGTATCG CCAGTTCCTG GACCGTGTGC CCGACGGTTT TCTTCTGTTT
GACGAGCAGG GCGGCCTGCT CGATGCCAAT GCCCAGGCCT GCGCCAGCCT GGGCCATCAC
AAGGCCGCCA TGCTGGGGCT GGGCATCATG GACCTATGGC TGGACCCGGA TGGACGGCCG
CGTGATTTCT GGCGGGACAT GGTCGTGGAC AGCCAGGCCC TTCTGCGAGG CCGGCTGATC
CGCCGCGATG GCAGCAGCTT GCCCGCCGAG ATCCATGTCC ATTGCCTGTC ACTGTCGGGC
AGGCGGCTTT TCTTCACTAC CTGGCACGAC CTCAGCGAGC GCACCGGCCA GGACGAGCAG
ATCGGCCAGC CCAATGCGCA GCTTGAGCCG CACCTGCAAA ACCGCACCTG GCCGTGGCAG
GACTCGACGC GCCTGCTGGA GACCGTGATG CGCGAGACGC CCGACCTGGT CTTCGCCAAG
GACCGGCAGG GCCGCTACAC CTTCGCCAAC CCCGCCACAG CGCGCTTTGC CGGACGCGCG
CCCGAAGACA TCGTGGGCAA GACCGACCAG GAGCTTTTCT CCGACAGCAG CTTCACCGAC
AGCGACCGCC GGGTGCTGGA CAGCGATGCG CCCGTGGTGA TGGACGATCA TTTGCTGGTC
GACGGGCAGC GCCGCATCTT CCAGTCCACC AAGATTCCCT ATCGCGATGC CGAGGGCCGG
ACCGTGGGCG TGCTGGGCAT TGCGCGCGAC ATCACCCTCA TGCGCCAGAC CGAGTCCCAG
CTGCAAAAAA GCTACGACGT GCTGCGCCAG GCCGAACAGC TGGCGCGCCT GGGCAGCTGG
ACATGGGAAC TGGACACCGG GCACTTTCAG GCTTCGGAGA TGATGTATGT GATGAACGGC
CTGGACCCCC AGGGTCCGCC ACTGACGCGC CATGCCCTGC GCGCCATGCT CGGGCCGCAG
GATCTTGCCC GGCTCACCGC TGCCGTGGAT CTGTGCATCA GCACCGGCCA GTCCTACAGC
ATCGATGTGG TCCAGCGCTG CCCGGACGGC CGGCAGTTCG CTGCCCGCCT CATGGGCCGG
GCCCTGCGCG ACGAGCAAGG CCGCATCGTC GCGCTCAGCG GCACGCTGCA GGACCTGTCC
GAACGCGAGG ACGCGCGCAT GCGCCTCGAA GCCCTGGCCG ACAACCTGCC CAGCGGCGCC
ATCTACCGCC TGGAAGGCGG CTTGACACAA CTGCGGCTCA GCTACATCAG CGCCGGCATA
GAGAACCTGA TCGGCGTGCC GGCCCACGCC ATCATGGCCG ATCGGCAGGT CTACCTGAAT
GCCATCCATC CCGAGGACCT GCCGCTCTAC CAGGGGATGA TGCAACGCTC GATCGATACG
CTGCGGGTCT TCGATTGCCG CTTTCGCGTG ATCAGGCCCG ACGGAGAGAT CCGCTGGCTG
CGCTGCCGCT CGGCTCCCCG GCGCTGTCAG GAGGGCATGG TCTGGGACGG CATCATGCTG
GACATCACCC GCGAACGCGA GGCCGAGCAG GCGCTGCAGC AGGCCAAGGA AGCCGCCGAA
GCGGCCGAAC GCGCCAAATC GGATTTCCTG GCCATCATGA GCCACGAAAT CCGCACACCC
ATGAATACCG TCATCGGCAT GACGCGCCTG GTGCAGCAGA CCGCGCTGAC ATCGCGCCAG
CGCGGCTACC TGGAGAAGGT GGAGCGCTCG GCCAGCGCCC TGCTGGCCGT GATCAACGAC
ATCCTCGATT TCTCCAAGAT AGAGGCGGGC ATGCTGGTGC TGGAGGAGGT GGACTTCGCC
CTTGACGATG TGCTGGAGAC CGTGACGGCC TCCACGGCGC TGCGCGCAGA GGAAAAGGGG
TTGGAAGTGG TCTATGCGCT GGACCCGCAG CTGCCGCCCC GTTTGCGCGG CGACCCAATG
CGCCTGGGCC AGGTGCTGAC CAACCTGGTC GGCAACGCCG TCAAGTTCAC CGAGCATGGC
GAGGTGGTGA TCTCCCTGCA TCTGGCGCCG CCGCCGGTGG ACGCGCCTGC GGATGCCGAT
GCGGACACCA CGGCAGCGCC CCTGCACCAC CTGTGCGTGA GCGTGCGCGA CACCGGCATA
GGCCTGGATG CATCGCGGGC CGAGCGGCTG TTCCAGCCCT TCACCCAGGC CGACATCCAG
ACCACGCGCC GCCACGGCGG CACCGGCCTG GGCCTGGCCA TCTGCCACAG GCTGGTGCAG
CTCATGGGCG GCGAGATCGG CGTGCGCAGC CAGCCCGGCC AGGGCAGCGA CTTCCGCTTC
ACGGCCAAGG TCCGGCTTGC CACGGATGCG CTGCCGGACG GCCACGACAA CCTGGGCAGC
ACCGGCGTTC TCATCGTCGA TGACAACGCC AGCGCGCGCG AGGCGCTGGC CGCCATGGTG
CGCAAACTGG GCATGCGCTG CGATACGGCG GCGGACGGCA TGCAGGCGCT GCGCATGCTT
CAAGAGGCCG CACGCCAGGA ATCCCCCTAT GGCCTGGCCC TGCTGGACTG GCGCATGCCC
GGCATGGACG GACTGGAGCT GGCACGCCGC ATGCGCGAGC GACAGGACCT GGTCAAGACC
CCGGCCGCGC TCATGGTCAC GGCCTTCGGG CGCGACGAAG TGCAGCTGCG TGCCGCGCAG
TTTGGCCTGC GGGGCCTGCT GATCAAGCCC CTGACCGCAT CGGCATTGCG GTCCTCCATC
CGTGAGGCGC TGCGGGACCC CGAATCGACC CAGCCTCAAG ACCCGGCGGC CGGCCCGTCG
CCACAGCAGC GCTACCCGGG CCTGCCTGGG CGCAGGGTGC TGGTGGTGGA TGACAACGTG
CTCAACCGCG AGGTGGCCAC CGAGCTGCTG GAGCAGGCCG GCATATCGGT ACAGACTGCG
CAAGACGGTC TGCAGGCGCT GCAGCTGCTC GACAGCCAGC CTTTCGATGC CGTGCTCATG
GACGTGCACA TGCCCGGCAT GGACGGCCTC AGTGCCACGC GTGCCCTGCG CACGCGCAGC
GCGCTGCGGC ATCTTCCGGT GATCGCGCTG ACTGCACAGG CCTATGTCGA GGAGCGCGCC
CGGATCGAGG CCGCAGGCAT GAATGCCCAT CTGACCAAAC CCGTTGACGA TGTGCTGCTG
TACGAGACGC TGCAGCGCTG CCTGCGCGCA GCCCCCCCGA CAACGGCAGC GCCTGCGCCG
GCCCCGCCCT CCCGGCCCAC GCCCCCAGCC CCTGCCCCGG CCTGGGATCC TGTGCAGCTG
CGGCAACGCC TTGCCAGCCA ATCGCCGCGC ATGCAGCATG CGATCGAAGG CTTTGCCCAG
GACTTTGCCG ATGCGCCGCA ACAGCTGCGC CGCGCCGCGC GCAGCGGCAA CTGGGCAACC
GTGGCGTCGC TGGCGCATAC CTTCAAGGGC AGCCTGGGCT ACCTGGGCGC GAACCTGCTG
GAGCAATGGT CGGCCATGGC CGAGACCGGC GCGCATGCCT GCATGTCAGG CGACGGCAAG
GGCGGGAATG CCCGGCCCAG CGGTGATCTG CCATCCCTGG TGCAGGCGCT GGCCGATGGG
CTGCAGGGCC TGCTGGCGGA AATCGCCGTG CGGTCCAGGC AGGCGGCCTT GCCACCCCTG
GCCACGGTGT CCAGCGCTGC GCCCTCGCAG CAGCGGCAGC GGCAGCAGCG GCAGCGGCGG
CCGATGACCG CAGAGGAAGT CTCATCCACG CTGGCTCGGC TGCGGCGGCA GATTGCCGAC
AGCGACTATG CCGCCGTGGC CGAACTGGAA CGGCTGCGGC CCCTGGTCAG CGGGCGCCAT
GCGTCCGTGC TGCAGCGCAT CCAGCGCTGC ACCGAGTCCC TGGAAACCGA GGCGGCGCTG
CAGGCGCTCG ATCAGCTGGC GCGGAGCATG GCCGCGAACC GGATGGCCCC ACAGGGAGCT
GCAGATGCTT GA
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| Protein sequence | MPDTPYRQFL DRVPDGFLLF DEQGGLLDAN AQACASLGHH KAAMLGLGIM DLWLDPDGRP
RDFWRDMVVD SQALLRGRLI RRDGSSLPAE IHVHCLSLSG RRLFFTTWHD LSERTGQDEQ
IGQPNAQLEP HLQNRTWPWQ DSTRLLETVM RETPDLVFAK DRQGRYTFAN PATARFAGRA
PEDIVGKTDQ ELFSDSSFTD SDRRVLDSDA PVVMDDHLLV DGQRRIFQST KIPYRDAEGR
TVGVLGIARD ITLMRQTESQ LQKSYDVLRQ AEQLARLGSW TWELDTGHFQ ASEMMYVMNG
LDPQGPPLTR HALRAMLGPQ DLARLTAAVD LCISTGQSYS IDVVQRCPDG RQFAARLMGR
ALRDEQGRIV ALSGTLQDLS EREDARMRLE ALADNLPSGA IYRLEGGLTQ LRLSYISAGI
ENLIGVPAHA IMADRQVYLN AIHPEDLPLY QGMMQRSIDT LRVFDCRFRV IRPDGEIRWL
RCRSAPRRCQ EGMVWDGIML DITREREAEQ ALQQAKEAAE AAERAKSDFL AIMSHEIRTP
MNTVIGMTRL VQQTALTSRQ RGYLEKVERS ASALLAVIND ILDFSKIEAG MLVLEEVDFA
LDDVLETVTA STALRAEEKG LEVVYALDPQ LPPRLRGDPM RLGQVLTNLV GNAVKFTEHG
EVVISLHLAP PPVDAPADAD ADTTAAPLHH LCVSVRDTGI GLDASRAERL FQPFTQADIQ
TTRRHGGTGL GLAICHRLVQ LMGGEIGVRS QPGQGSDFRF TAKVRLATDA LPDGHDNLGS
TGVLIVDDNA SAREALAAMV RKLGMRCDTA ADGMQALRML QEAARQESPY GLALLDWRMP
GMDGLELARR MRERQDLVKT PAALMVTAFG RDEVQLRAAQ FGLRGLLIKP LTASALRSSI
REALRDPEST QPQDPAAGPS PQQRYPGLPG RRVLVVDDNV LNREVATELL EQAGISVQTA
QDGLQALQLL DSQPFDAVLM DVHMPGMDGL SATRALRTRS ALRHLPVIAL TAQAYVEERA
RIEAAGMNAH LTKPVDDVLL YETLQRCLRA APPTTAAPAP APPSRPTPPA PAPAWDPVQL
RQRLASQSPR MQHAIEGFAQ DFADAPQQLR RAARSGNWAT VASLAHTFKG SLGYLGANLL
EQWSAMAETG AHACMSGDGK GGNARPSGDL PSLVQALADG LQGLLAEIAV RSRQAALPPL
ATVSSAAPSQ QRQRQQRQRR PMTAEEVSST LARLRRQIAD SDYAAVAELE RLRPLVSGRH
ASVLQRIQRC TESLETEAAL QALDQLARSM AANRMAPQGA ADA
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