Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1503 |
Symbol | |
ID | 5747059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1685010 |
End bp | 1686551 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296583 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001562532 |
Protein GI | 160896950 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTTGA ACTCCCTGCC CGCTGCCGCA TCGATCCTTG TCGTGGACGA CGAGCCGGAT CTGCGCACCC TCTATGAACT GACCCTTCTG CGTGAAGGCT ACCGCGTGGA GACCGCCGCC AGCGTGGGCG AGGCGCGCGA GCAGTTGCAG ACCCAGCGCT TCGACGTGGT CATCACCGAC ATGCGCCTGC CCGACGGCAT GGGCATGGAA CTGCTGCAGG ACCTGCGCAG CCAGCAGCGG CGCGAGCGCT GCGTGGTCAT GACGGCCTAC GGCTCCGCCG AGAACGCCGT CGAGGCCCTG CGCTCAGGCG CCTTCGACTA CCTGACCAAG CCCGTGGACC TCAAGCAGTT CCGCCTGGTC GTGGCCTCGG CCGCCCAGGG CGTGGGCGGT GTGCCGGCCC CGGGGGTGAT GCCGGCGCGC AGCCCTTCGG TCTCTCCCGC CGCCAGCCCG GTGCTCAACG GCAGCGGCGC ACTGGACGCC ATGGTGGGTG ACTCCCCCGC CATGCAGGCC GTCAAGCAGC GCATTGCCAA GGTGGCCCGC GGCATGGCGC CGGTGCTGGT GCATGGCGAG TCGGGCACGG GCAAGGAGCT GGTGGCCCGC GCGCTGCATG CCTGCAGCCA GCGCGCCCAC GGTCCCATGG TGGCCGTGAA CTGCGGCGCC ATTCCCGAAA ACCTGCTGGA GGCGGAGTTC TTCGGCGCGC GCAAGGGCTC CTATACCGGC GCCACCCAGG ACCGCGACGG CTACTTCCAG GCGGCGCGCG GCGGCACCTT GTTTCTGGAC GAGATCGGCG ACCTGCCCCT GGCCATGCAG GCCAAGCTGC TGCGCGCCAT CCAGGAGCGC CGCGTGCGCC CCCTGGGCTC CGCACAGGAG GAAGCGGCCG ATGTACGCAT CGTCAGCGCC ACCCACCGCG ACCTGGCTGC CGATGTGCAG CAGGGGCGCT TCCGGCAGGA CCTGTACTAC CGCCTCAATG TCATCGAGGT ACTGCTGCCC CCGCTGCGCG AGCGCCGCGA AGACCTGCCT GCCCTGTGCC GCGCCCTGCT GGCACGGCTG TCGCAGGAAT CCGGCCTGCC CATGCCCGAG ATCGACGAGC TTTCAGTGCA GCAGATCGCC CGCCTGCCCC TGCCCGGCAA TGTGCGTGAA CTGGAGAACC TGCTGCACCG CGCCATCACG CTGGGCGAGG ACGGGCCGCT GCGCATAGAT CCCGAGATGC AGCTGCCCTG CGGCACTCCG CCTGCACCGC CCGCACCGCC TGCATCCGCC TCGCCCTCTC CTTCGCTCTC GCCTTCGCGC CCCGTGCCGC CAGGCGGCCC GCTATCGCCA ACCGATGCCG ACCTGCCCCG TGACCTGCAG GCCTGGCTGG ACGAGCGCGA GCGCGGCATC CTGGTGCAGG CGCTGCAGGA AAACGGCTTC AACCGCACGG CCACCGCCGC GCGCCTGGGC CTGAGCCTGC GCCAGATCCG CTACCGCATC GACCGGCTGA ACATCGCCCT GCCCGGCGAT GCCAGCGCGG AGACGGACGG AGGCGGCCAT GGCGAGTCCT GA
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Protein sequence | MPLNSLPAAA SILVVDDEPD LRTLYELTLL REGYRVETAA SVGEAREQLQ TQRFDVVITD MRLPDGMGME LLQDLRSQQR RERCVVMTAY GSAENAVEAL RSGAFDYLTK PVDLKQFRLV VASAAQGVGG VPAPGVMPAR SPSVSPAASP VLNGSGALDA MVGDSPAMQA VKQRIAKVAR GMAPVLVHGE SGTGKELVAR ALHACSQRAH GPMVAVNCGA IPENLLEAEF FGARKGSYTG ATQDRDGYFQ AARGGTLFLD EIGDLPLAMQ AKLLRAIQER RVRPLGSAQE EAADVRIVSA THRDLAADVQ QGRFRQDLYY RLNVIEVLLP PLRERREDLP ALCRALLARL SQESGLPMPE IDELSVQQIA RLPLPGNVRE LENLLHRAIT LGEDGPLRID PEMQLPCGTP PAPPAPPASA SPSPSLSPSR PVPPGGPLSP TDADLPRDLQ AWLDERERGI LVQALQENGF NRTATAARLG LSLRQIRYRI DRLNIALPGD ASAETDGGGH GES
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