| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1502 |
|---|
| Symbol | |
|---|
| ID | 5747058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 1684388 |
|---|
| End bp | 1685023 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641296582 |
|---|
| Product | N-acetyl-anhydromuranmyl-L-alanine amidase |
|---|
| Protein accession | YP_001562531 |
|---|
| Protein GI | 160896949 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3023] Negative regulator of beta-lactamase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGTC CTGATCCACA GGCGCAAGCC ACCCAGGCCC CGGCCTGGAC CTGGCAAGGC
GGCTGGCTGC AGCAGGCCCG CCACCTGCCC TCGCCCAACT TTGGCGAGCG CCCGGCCCAG
GCGCTGATCG ATCTGGTCGT CGTGCACTCC ATCAGCCTGC CCCCGGGCGA GTACGGCACG
GGTGCGGTCC AGCAACTGTT CACCAACCAG CTCGACTGGG ACGCCCATCC TTACTACCAG
GGGATACGCG GCCTGGAGGT GTCGGCGCAT TTCTTCATCA CGCGCCAGGG CGAGGTCTGG
CAGTTTGTGG ACTGCGATGC GCGCGCCTGG CATGCAGGCG CTTCCTGCTG GCGGGGCCGC
GACCGCTGCA ACGACGACTC CATCGGCATA GAACTCGAAG GCCTGGAGGG CCTGCGGTTC
GAGCCGGCCC AGTACGCGGC GCTCGATGCC CTGTGCAACG CCATCGCGGC GCGCTACCCC
GTGGCCCATC TCGCAGGCCA TGAGCACATC GCGCCGGGCC GCAAATGCGA TCCGGGCGCA
GGCTTCGACT GGCACCGGCT GCGCGGGCTG CTGGCCCATC ACCCCGCCAC GGCGAACTGG
CAGTTGCCGC CCGGCGCGGG CCAGCCCTCC ACGTAA
|
|---|
| Protein sequence | MASPDPQAQA TQAPAWTWQG GWLQQARHLP SPNFGERPAQ ALIDLVVVHS ISLPPGEYGT
GAVQQLFTNQ LDWDAHPYYQ GIRGLEVSAH FFITRQGEVW QFVDCDARAW HAGASCWRGR
DRCNDDSIGI ELEGLEGLRF EPAQYAALDA LCNAIAARYP VAHLAGHEHI APGRKCDPGA
GFDWHRLRGL LAHHPATANW QLPPGAGQPS T
|
|---|
| |