Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1471 |
Symbol | murC |
ID | 5747027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1647953 |
End bp | 1649386 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641296551 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_001562500 |
Protein GI | 160896918 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.312557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCACG CCATTCATCA CATCCATTTC GTCGGCATCG GCGGCGCCGG AATGAGCGGC ATCGCCGAGG TGCTGCACAA CCTGGGTTAC GCCATCTCGG GCTCGGACCT GTCCGACAGC GCCACGCTGC GCCGGCTCGC CGGCCTGGGC ATCGCCACCC ACGTCGGCCA TGCGGCCGCG CACATCGAAG GGGCTGACGC CGTCGTCACC TCCACCGCCG TGCAGTCCGA CAATCCCGAG GTGCTGGCCG CGCGCGAGCG CAAGATTCCC GTCGTGCCGC GTGCGCTCAT GCTGGCCGAG CTCATGCGCT TCAAGCAGGG CATCGCCATC GCGGGCGCCC ATGGCAAGAC CACGACCACC AGCCTGGTGA CCAGCGTGCT GGCCGAGGCC GGGCTGGACC CGACCTTCGT CATCGGCGGC AAGCTCAACA GCGCGGGCGC CAACGCCAAG CTGGGCCAGG GCGACTACAT CGTGGTCGAG GCGGACGAGT CCGATGCCTC CTTCCTGAAC CTGCTGCCCG TGATGGCCGT CGTCACCAAC ATCGACGCCG ACCACATGGA AACCTACGGC CATGACTTCG GCAGGCTCAA GGGCGCCTTC GTCGATTTCC TGCACCGCAT GCCGTTCTAT GGCCGCGCCA TCGTCTGCGT GGACAGCCCG GCCGTGCGCG AGATCCTGCC CCAGGTGGCC CGCCCCGTGA CCACCTACGG CTTTGCCGAG GACGCACAGG TGCGCGCCCT CAACGTGCGC GCCGAAGCTG GCAGCATGCA TTTCACAGTG CGCCGCAGCA ACGGCCAGAG CTATCCCGAC CTGGACGTGG TGCTGAGCCT GCCGGGCGAG CACAACGTGC TCAACGCCCT GTCGGCCGTG GCCGTGGCCA TGGAGCTGGA GATCTCCGAC GACGCGCTGC TGCGTGCCTT CGAAAGCTTC AAGGGCGTGG GCCGGCGCTT CCAGCGCTAT GGCGAACTGG CGGCTGCCGA CGGCGGCAGC TTCACCGTCA TCGACGACTA TGGCCACCAC CCCGTCGAGA TGGCGGCCAC GCTGGCGGCC GCGCGCGGCG CCTTCCCGGG CCGTCGCCTG GTGCTGGCAT TCCAGCCGCA CCGCTACAGC CGCACGCGCG ACTGCTTCGA GGATTTCGTC AAGGTCATCG GCCTGGCCGA CGCCGTGCTG CTGACCGAGG TCTATGCGGC CGGCGAGGCG CCCGTGGTGG CGGCCGACGG CCGCTCGCTG GCACGCGCCC TGCGCGTGGC CGGCCGTGTC GAGCCGGTGT TTGTGGAAAA CGTTGCCGAG CTGCCGGCGG CCATTGCCGT CAATGCCCGC GATGGCGACG TGTTGTTGTG CATGGGGGCA GGCTCGATTG GCGCCGTGCC CGGAAAGTTG GTTGAAATGC TTCAGAAACA AGAGCTGCAG GCGCAGCAGG GAGCTGCGCA ATGA
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Protein sequence | MKHAIHHIHF VGIGGAGMSG IAEVLHNLGY AISGSDLSDS ATLRRLAGLG IATHVGHAAA HIEGADAVVT STAVQSDNPE VLAARERKIP VVPRALMLAE LMRFKQGIAI AGAHGKTTTT SLVTSVLAEA GLDPTFVIGG KLNSAGANAK LGQGDYIVVE ADESDASFLN LLPVMAVVTN IDADHMETYG HDFGRLKGAF VDFLHRMPFY GRAIVCVDSP AVREILPQVA RPVTTYGFAE DAQVRALNVR AEAGSMHFTV RRSNGQSYPD LDVVLSLPGE HNVLNALSAV AVAMELEISD DALLRAFESF KGVGRRFQRY GELAAADGGS FTVIDDYGHH PVEMAATLAA ARGAFPGRRL VLAFQPHRYS RTRDCFEDFV KVIGLADAVL LTEVYAAGEA PVVAADGRSL ARALRVAGRV EPVFVENVAE LPAAIAVNAR DGDVLLCMGA GSIGAVPGKL VEMLQKQELQ AQQGAAQ
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