Gene Daci_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1457 
Symbol 
ID5747013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1631302 
End bp1631796 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID641296537 
ProductTraR/DksA family transcriptional regulator 
Protein accessionYP_001562486 
Protein GI160896904 
COG category[T] Signal transduction mechanisms 
COG ID[COG1734] DnaK suppressor protein 
TIGRFAM ID[TIGR02420] RNA polymerase-binding protein DksA 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.969843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTACCA CTACGCAAAC GCCTTCGTCG GGATCGACGA AACGAGACCC CAAGCTGGCC 
AATGCCTGGA AGACCAAGTC GGTGGAAGAA CTGACGGATG CCGAAGTGCT GGCCATGTCG
GATGACGAAT ACATGAATGA GAAGCAGATG GCGTTCTTCC GCCTCAAGCT GCTCACTCTC
AAGCACGACA TGCACACCAA CGCGGGTGAG ACGGCAGAAA ACCTGCGCGA GGACACCGTG
GTGGTTCCCG ATCCGGCCGA CCGCGCCACC ATCGAGGAAG AGCATGCGCT GGAACTGCGC
ACGCGCGACC GCGAACGCAA GCTGCTCAAG AAGATCGAGC AATCCATTGC ACGCATCGAC
GCAGGCGACT ACGGCTACTG CGACGAGACC GGCGAGCCCA TCGGCGTGGG CCGCCTGCTG
GCCCGCCCCA CGGCCACGCT GTCGCTGGAA GCCCAGCAGC GCCGTGAGCT CAAGCAGAAG
ATGTATGGGG ATTGA
 
Protein sequence
MPTTTQTPSS GSTKRDPKLA NAWKTKSVEE LTDAEVLAMS DDEYMNEKQM AFFRLKLLTL 
KHDMHTNAGE TAENLREDTV VVPDPADRAT IEEEHALELR TRDRERKLLK KIEQSIARID
AGDYGYCDET GEPIGVGRLL ARPTATLSLE AQQRRELKQK MYGD