Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1407 |
Symbol | |
ID | 5746962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1565126 |
End bp | 1566055 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641296486 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
Protein accession | YP_001562436 |
Protein GI | 160896854 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATTC TGGTCAATAT CCACCCGAGC ATGGGCGCGC CCATCGTCGA CTCGCTGCGC GCGCTGGCGC CCGGCGTGCA GGTCTGGGGC CACCGCGAGG AGGCGCCGGC CGACGCGGTC GAGGCCATGC TCGCCTGGAG CCTCAAGCCG GGCGTGCTGC CGGCCTATCC GGGCCTGAAG CTGCTGTGCG CACCCAGCGC GGGCGTGGAC AAGCTGCTGG CCGTGCCTGA TCTGCCGGCC GGCCTGCCCG TGGCGCGCAC GGTCGATCCG CAGCAGCATG TGGAGATCGC ACAGTACGTG GTCGGCACCG CGCTGCGCCA CACGCGCGAA CTGGACCTGT TCGCGCGCCA GCAGCAGGCC GGCGACTGGC TGCGCCGCCC CGTGCGCGCC AGCGCAGACT GCCGCGTGGG CATCCTGGGC CTGGGCGAGG TCGGCCGCTT CGTGGCCGGC GCCATGCAGG CCATCGGCTA CCCCGTCGTA GGCTGGAGCC GCAGCGCCAA GAGCATTGCA GGCCTGGCCA CGCACAGCGG TGCCGAAGGT CTGAAGCAGC TGCTGTCCAC CAGCGACATC CTGGTCTGCG CCTTGCCGCT CACGCCCGAG ACGCGCGACC TGCTGGACCG CCGAACCCTG TCCCTGCTGC CGCGTGGCGC CTACTTCATC AACGTGGGGC GCGGCGAACA GGTGGTGGAA GACGACCTGC TGGCCCTGCT CGACGAAGAC CACCTGGCCG GCGCCGCGCT GGACGTGCTG CGCGACGAAC CGCCCCAGCC CGGCAACAAG GTCTGGGGCC ATCCCAAGGC CTTTGTCACG CCGCACATCG CGGCCCAGGC CTCGGCCGAC ACCGTGGCCC GCCAGTGCCT GGAGAACCTG CGCCGCCTGC GCGCAGGCGA GCCGCTGCTC AACCTTGTGG ATGTGGCGCG GGGGTATTGA
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Protein sequence | MGILVNIHPS MGAPIVDSLR ALAPGVQVWG HREEAPADAV EAMLAWSLKP GVLPAYPGLK LLCAPSAGVD KLLAVPDLPA GLPVARTVDP QQHVEIAQYV VGTALRHTRE LDLFARQQQA GDWLRRPVRA SADCRVGILG LGEVGRFVAG AMQAIGYPVV GWSRSAKSIA GLATHSGAEG LKQLLSTSDI LVCALPLTPE TRDLLDRRTL SLLPRGAYFI NVGRGEQVVE DDLLALLDED HLAGAALDVL RDEPPQPGNK VWGHPKAFVT PHIAAQASAD TVARQCLENL RRLRAGEPLL NLVDVARGY
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