Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1398 |
Symbol | |
ID | 5746953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1555283 |
End bp | 1556539 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641296477 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001562427 |
Protein GI | 160896845 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGACA GCCACAACGA TCAGAACCAG GACATCGACT TCCCGCTGGA GGGTGTGCGC GTGCTCGACC TCTCGCGCGT GTTCGCGGGG CCGCTGTGCG GCATGGTGCT GGCCGACTTC GGCGCCGAAG TGGTCAAGGT CGAGCACCCG GGCCGCGGCG ACGACACGCG CGACTGGGGC CTGCGCATCG GCAAGACCGA GACCACCTAC TACAACAGCA TGAACCGCAA CAAGCGGTCC ATCACGCTGG ACCTGCAGAC CCCCGAGGGC GTGAAGATCG TCCACGACCT GCTGCCCCAG TTCGACGTGG TCATCCACAA CTTCAAGACC GGCGGCGCCG AGAAGCTGGG CCTGGGCTAC GAACAGCTCA AGGCCATCAA GCCCGGCATC ATCTACTGCG CCGTGGCCGG CTACGACAGC AGCGGCCCCG AGGCCAAGCG CCCCGGCTAC GACCTGGTCA TCCAGGGCGA GGCGGGCCTC ATGGCGCTCA ACGGCGAGGC CGGCACGCCG CCGCTCAAGT TCGGCGTGGC CGTGGTCGAT CTCATGACCG GCATGTACGC GGCCCAGGCC ATCCTGGCCG CGCTGTTCCG CCGCGAGCGC ACGGGCAAGG GCCGCCTCAT CGAGATGGCG CTGTACGACA GCGGCATCAT GATCACCGGC TACTACGGCC TGGACGCCAT GCAGCTGGGC CACGACCCCG AGCGCTACGG CAATGCCCAC CCCTCCATCG TTCCCTACGG CATGTACGAG GCGGCCGACG GCCCGCTGAT CATCGCCGTG GGCAACAACG CCCAGTTCGA CAAGTTCTGC CGCCAGGTGG TGATGCGCCC CGACATCGTC GAGGACGCGC GTTTCTCCAC CAACGTCAAC CGCGCCAAGA ACCGCCTGGA GCTGGGCCCC ATGCTCAAGG AACTGATCCG CTCCTTCCCG CGCGATCTGC TGCTGGAGCG CCTGACGGCC GCCGGCATCC CCTGCGGCCG CGTGGCCGGC CTGCACGAGG CCCTGACCAG CGAGCGCACG CGCCGTGGCG GCCTGCTGCG TGACATGCCC CACCCCGTGG TCGGCACCAC GCCCGTGTTC GCGCCGCCCT ACCGCCTGGA CGGCCAGCGC CTGCCCATCC GCCATGCACC GCCCACGCTG GGCGAGGGCA CGCGCGAGGT GCTGCACCGG CTGCTGAGCA TGAGCGACGA GCAGCTGCAG CAGCTGCAGT CCAAGGGCGT GCTGACCCTG CCCGAGACCC CCGCGCAACA GGGATAA
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Protein sequence | MADSHNDQNQ DIDFPLEGVR VLDLSRVFAG PLCGMVLADF GAEVVKVEHP GRGDDTRDWG LRIGKTETTY YNSMNRNKRS ITLDLQTPEG VKIVHDLLPQ FDVVIHNFKT GGAEKLGLGY EQLKAIKPGI IYCAVAGYDS SGPEAKRPGY DLVIQGEAGL MALNGEAGTP PLKFGVAVVD LMTGMYAAQA ILAALFRRER TGKGRLIEMA LYDSGIMITG YYGLDAMQLG HDPERYGNAH PSIVPYGMYE AADGPLIIAV GNNAQFDKFC RQVVMRPDIV EDARFSTNVN RAKNRLELGP MLKELIRSFP RDLLLERLTA AGIPCGRVAG LHEALTSERT RRGGLLRDMP HPVVGTTPVF APPYRLDGQR LPIRHAPPTL GEGTREVLHR LLSMSDEQLQ QLQSKGVLTL PETPAQQG
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