| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1393 |
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| Symbol | |
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| ID | 5746948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1548481 |
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| End bp | 1550598 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296472 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase NAD-binding |
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| Protein accession | YP_001562422 |
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| Protein GI | 160896840 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC AAGCCCAGGC TTCCGTGGTC CAGACCCGCC TTGATGGTGC CGTGCTGGTG
GTCAGCATCA ACAACCCCCC CGTGAATGCC CTGGGCCAGG CCGTGCGCGC CGGCCTGCTG
GCTGCCGTGG AGCAGGCCGA ATCGGATGCC GCCGTCAAGG CTGTGCTCAT CGTGGGTGAG
GGCAAGGCCT TCATCGCCGG AGCAGACATC CGCGAATTCG GCAAGCCCGC CATGCCGCCC
TCGCTGCCCG AGGTGCTCAA TCGCCTCGAA GCCTCCGACA AGATCGTGGT CGCCGCCATC
CATGGCCCGG CCCTGGGCGG CGGCCTGGAA GTCGCCATGT CGGCCCACTA CCGCCTGGCT
TTGCCGGCTG CCAAGCTCGG CCTGCCCGAA GTCAACCTGG GCCTGCTGCC CGGCGCTGGC
GGCACGCAGC GCGCACCGCG CCTGATGGGC GTGAAGGCGG CCGCCGACCT CATGCTCAGC
GGCAAGCACC TGTCGGCCAA GGCCGCGCTG GCCGCCGGCC TGGTGGACAA GTTGGTGGAC
GGCACCGACG CCACCGCTGC AGGCCTGGCA TACACCAACG AACTGCTGGC AACCAATACC
GCGCCGCGCC GCACGCGTGA CATCGAGATT GCCGACAAGG CCGCCGCCCT GGCCGAACTC
GACGCGCTGG CCGCCGACAC CGCCAAGAAG AGCCGCGGCC TGTTCTCGCC GCTGAAGATC
GTGGAATGCG TGCGCGCCGC CGTGGAGCTG CCCTTCGACG AAGGCATCGC CAAGGAGCGT
GCCCTGTTCG TGGAATGCCT GAACAGCCCG CAGCGCGCCG GCCTGATCCA TGCCTTCTTC
GCCGAGCGCG AAACCGCCAA GATTCCCGAA GCCAAGGCTG CCGCGCCGCG CCACTTTGCC
AAGATCGCCG TCATCGGCGG CGGCACCATG GGCGCCGGCA TCACGGTGTC CGCGCTGGAC
GCGGGCCTCA CGGTGACCAT GATCGAGCGC GACGCCGACT CCATCGCGCG CGGCCAGGCC
AATGTGGAGA AGGTCTACAA CGGCCTGATC GCCAAGGGCC GCATGACCGA GGAGGCCAAG
GCCGCCGTCA TGGCGCGCTA CACGCCCAGC ACCTCCTATG ACGACATCAA GGATGTGGAC
CTGGTGATCG AGGCCGTGTT CGAGGACCTC GAAGTCAAGA AGGCCGTGTT CAAGGAACTG
GACCGCGTCT GCAAGCCCGG CGCCGTGCTG GCCACCAACA CCTCCTACCT GGACATCGAC
GCCATTGCCG CCGCCACCTC GCGCCCGCAG GACGTGATCG GCCTGCACTT CTTCAGCCCC
GCCAACATCA TGAAGCTGCT GGAGATCGTG GTGCCCGCCA AGGTGGCGCC CGACGTGGTG
ACCACGGCCT TCGAGCTGGC CAAGCGCATG AAGAAGGTGC CCGTGCGCGC CGGCGTCTGC
GACGGCTTCA TCGGCAACCG CATCCTGGCC GTCTACAAGC AGGCTGCCGA CTACATCATG
GAAGACGGCG CCAGCCCCTA CGAGATCGAC GAGGCCGTGC GCGGCTTCGG CTACCCGATG
GGCCCGTTCC AGGTCACCGA CCTGGCCGGC GGCGACATCG GCTGGGCCAC GCGCAAGCGG
CGCGCTGCCA CGCGCGATCC CAAGGCCCGC TACGTCGAAG TGGCCGACCG CGTCTGCGAG
CGCGGCTGGT TCGGCCAGAA GACGGGCCGT GGCTTCTACC TCTACCCGCA CGGCGCGCGC
GTCGGCCAGC CCGACCCCGA AGTGCTGGCC ATCGTCGATG CCGAACGCGC CAAGAAGGGC
GTGACGCCGC GCAAGTTCAC CCCTGAGGAA ATCATGCGCC GCTACATGGC CGCCATGGTC
AACGAAGGCG CCAAGGTGGT GGAGGAGGGC ATTGCCCTGC GCCCGCTGGA TGTGGACGTG
ACCTTCCTGT CCGGCTACGG CTTCCCGCGC TTTCGTGGCG GCCCCATGAA GTGGGCCGAC
ATGCAAGGTC TGGACAAGGT GCTGGCCGAC ATCCGCGAAT TCGCCAAGGA AGACGCGCTG
TTCTGGAAGC CCGCTCCACT GCTCGAAAAG CTGGTCGCCG AAGGCCGCGA TTTCGAAAGC
TTGAACAAGG CGGCGTAA
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| Protein sequence | MSEQAQASVV QTRLDGAVLV VSINNPPVNA LGQAVRAGLL AAVEQAESDA AVKAVLIVGE
GKAFIAGADI REFGKPAMPP SLPEVLNRLE ASDKIVVAAI HGPALGGGLE VAMSAHYRLA
LPAAKLGLPE VNLGLLPGAG GTQRAPRLMG VKAAADLMLS GKHLSAKAAL AAGLVDKLVD
GTDATAAGLA YTNELLATNT APRRTRDIEI ADKAAALAEL DALAADTAKK SRGLFSPLKI
VECVRAAVEL PFDEGIAKER ALFVECLNSP QRAGLIHAFF AERETAKIPE AKAAAPRHFA
KIAVIGGGTM GAGITVSALD AGLTVTMIER DADSIARGQA NVEKVYNGLI AKGRMTEEAK
AAVMARYTPS TSYDDIKDVD LVIEAVFEDL EVKKAVFKEL DRVCKPGAVL ATNTSYLDID
AIAAATSRPQ DVIGLHFFSP ANIMKLLEIV VPAKVAPDVV TTAFELAKRM KKVPVRAGVC
DGFIGNRILA VYKQAADYIM EDGASPYEID EAVRGFGYPM GPFQVTDLAG GDIGWATRKR
RAATRDPKAR YVEVADRVCE RGWFGQKTGR GFYLYPHGAR VGQPDPEVLA IVDAERAKKG
VTPRKFTPEE IMRRYMAAMV NEGAKVVEEG IALRPLDVDV TFLSGYGFPR FRGGPMKWAD
MQGLDKVLAD IREFAKEDAL FWKPAPLLEK LVAEGRDFES LNKAA
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