Gene Daci_1386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1386 
Symbol 
ID5746941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1543283 
End bp1544194 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID641296465 
Producthypothetical protein 
Protein accessionYP_001562415 
Protein GI160896833 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.351938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC CGCAACCGCG CATCGCCCTG CTGATCGACG CCGACAACGC GCCGGCCGAG 
ATGATCGACG AGATCCTGAC CGAGCTGTCG ACCTTCGGCG TCATCGACAT CCGCCGCGCC
TACGGCAACT GGACCAAGCA TTCGCTCAGC GGCTGGCAGC GCAAGCTGCT CGATTTCGCA
CTGCGGCCCA TGCAGCAGTT CGACTACTCC AAGCACAAGA ACGCCACCGA CATGGCGATG
ACCGTGGACG CCATGGAGCT GCTCTACACC GAGCGGCCCG ACGCCTTCGG CATCGTCTCC
TCCGACGCCG ACTTCACGCC GCTGGTCATG CACCTGCGCT CCAAGGGCGC GGCCGTCTAC
GGCTTCGGCA TGGCGCAGAC GCCCCAGCCC TTCGTCAATG CCTGCTCGCG CTTCCTGTAC
CTGGAGGCGC TGGGCGAGGC GGCGCCCGCC AACGGCAATG GCCAGGACGC CGCGCATGAG
GCGGGCCAGG CGGCGGTGCC GCCCGTGGCT GCAGCCGCAG TGGCTACCGC TCCCCAGCCG
CCGAACGGCG CTGGAAAGGA GCGTGCGCCG GCCCAGGCCG AGAACGAACC CTCGGCAGAA
CCCCAAGCCC AGCCCCAGCG TCCCTGCCTG CGCGTTCCCA GCCAGGAACT GCGCCAGGAC
AAGCGGCTGC TGGCCATGCT GCGCAGCGCC GTCAACGCCA CGCAGGATGA AAGCGGCTGG
GCCCATGTGG GCGCCGTGGG CGCGCAGATC GGCAACAAGG CCTCGTTCGA TGCGCGCAAC
TACGGCTACG CCACGCTCAC CAAGCTGCTG GCGGCCACGC AGGCTTTCGA GATGCGCGAC
GAAGGCACCT CGCGCGTGGC CGTGCGCGAC AAGCGCCTGG CCAAGGCCCA GTCCAGGCCG
TCCGGCAATT GA
 
Protein sequence
MPEPQPRIAL LIDADNAPAE MIDEILTELS TFGVIDIRRA YGNWTKHSLS GWQRKLLDFA 
LRPMQQFDYS KHKNATDMAM TVDAMELLYT ERPDAFGIVS SDADFTPLVM HLRSKGAAVY
GFGMAQTPQP FVNACSRFLY LEALGEAAPA NGNGQDAAHE AGQAAVPPVA AAAVATAPQP
PNGAGKERAP AQAENEPSAE PQAQPQRPCL RVPSQELRQD KRLLAMLRSA VNATQDESGW
AHVGAVGAQI GNKASFDARN YGYATLTKLL AATQAFEMRD EGTSRVAVRD KRLAKAQSRP
SGN