Gene Daci_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1370 
Symbol 
ID5746925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1524792 
End bp1525808 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID641296449 
Producthypothetical protein 
Protein accessionYP_001562399 
Protein GI160896817 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC TGTCCGTGAA CCCCTCCGTC CCTACCCGCC GCAAACTGCT GGGCGCAGGC 
CTTGGCCTGG CGGGCCTGTC CGCGCTGGCG CCGCTGGCCG CACGCGCCGA TGACAAGTAC
CCCTCGCGCC CGATCACGCT GGTCGTGCCG TTTCCGCCCG GCGGTTCGGT GGACATCATG
GGCCGCCAGT ACGCCGAGCC CCTGTCGCGC ATCCTGGGCG CGCCCATCGT GGTGGAGAAC
CGGCCCGGCG CGGGCGGCTC GGTAGCCACG CAGTACGTGT CGCGCGCCAA GCCTGACGGC
TACACCCTGG TCGTGTCCTC GCAGAGCAGC CACCTGGCCA ATCCGCTGAC CCAGCCCAAG
GTGGGCTACG ACCCCATCAA GGACTTCGAG AACATTGCCA TCCTGGGCCG CCAGCCCAAT
GCGCTGATGG TGCATTCCAG CCTGCCCGTG AAGAACTTCC AGGAGTTCAT CGAGTACGTG
AAGAAGCGCC CCGGCCAGGT CAACTACGGC AGCGCCGGCA TCGGCAGCAT GGGCCAGCTC
AATGTGGAAA TGCTCAAGGC CGCCACGGGC ATCTTTGCCA CGCACATCCC CTACCGTGGC
GGCTCGCCGC TGGTCACGGC CGCCATCGGC AACGAGGTGC AGTTCATCCT CGACAACCTG
GTCTTCATGC TGCCCCACGT GCAGTCGGGC AAGGTGCGCG CCCTGGTCGT GGCCTCGGAG
CAGCGCCTGC CCATGCTGCC CGACGTGCCC ACCATGGCCG AGGTCGGCTA TCCCCAGCTC
AACATGAGTT CCTGGACCGG CATTGCGGCG CCTGCGGGCA CGCCCGACGC CATCGTCCAG
ACGCTGTACA AGGCCATCCG CCAGGCGGCC ACGGCGCCGG CCATGGTGGC CAGCCTCAAG
GAGCGCGGCG TGGTCGCCCC CGAGGAGATG AGCCCCGCCG CCTTCGAGAA CATGATGGCC
GAGCGCCTGA AGCTCTTCGG CGAGGTGGTG CGCAAGGCCC ATATCGTGGC CGAGTAA
 
Protein sequence
MKNLSVNPSV PTRRKLLGAG LGLAGLSALA PLAARADDKY PSRPITLVVP FPPGGSVDIM 
GRQYAEPLSR ILGAPIVVEN RPGAGGSVAT QYVSRAKPDG YTLVVSSQSS HLANPLTQPK
VGYDPIKDFE NIAILGRQPN ALMVHSSLPV KNFQEFIEYV KKRPGQVNYG SAGIGSMGQL
NVEMLKAATG IFATHIPYRG GSPLVTAAIG NEVQFILDNL VFMLPHVQSG KVRALVVASE
QRLPMLPDVP TMAEVGYPQL NMSSWTGIAA PAGTPDAIVQ TLYKAIRQAA TAPAMVASLK
ERGVVAPEEM SPAAFENMMA ERLKLFGEVV RKAHIVAE