Gene Daci_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1292 
Symbol 
ID5746847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1438697 
End bp1439623 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content71% 
IMG OID641296371 
Producthypothetical protein 
Protein accessionYP_001562321 
Protein GI160896739 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.232025 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC CGGCACAGCG CAGTTGGGAT TGGCTGCTGC CACCTGCCGT GCAAACGCAG 
GACGGCGGGC TGAAGCCGCG CCGTGACCGG GCCGCTCCCC CCGCCCAGCC TCCATCCGCG
CCTCCTCCTT CATCTGCCCC GTCTCCATCC ACCATCCCCG AGCACAGTCC CCGCATCCAC
CCGGAGGCCA ACCAGCAGGC GGTCCTCCAG GGACAGGTGC TGCATTACCG GCTGCAGCGC
TCGCGCCGAC GCACCATAGG CTTCACCATC GGCGCGCAGG GGCTGGTGGT CAGCGCACCT
GCCTGGGTCA ACATGGCTGC CATCGCGCAG GCGCTGGAGG CGAAATCGGG CTGGATACTG
CGCAAGCTGC ATGAGGCCGG CCAGCGCCAG CAAGCCCAGC AGGCGGCACG CATCCGATGG
GAGCACGGCG CAGAGATCGG CTATCTGGGC CGCCCCTTGC AGCTGTGCCT GACCGGTGGC
GAAACCCAGC CGCTGCGCAC GCGCCAGGTG CACCGTGAAC AGGCGGCCGA CGGCAGCCAG
TCCCTGCACC TGCCGCTGGC GCCTGGGGCA TCGGCCGCCG AGGTGCGCGC CTGCGTGCAG
GCCTGGATGC TGCGCGAGGC CCGCTCCTGG TTCACGGCCA GCCTGCAGCG CCATGCGCCG
CTGCTGGGCG TGCAATGGAC CAGCCTGCGC CTGACCAGCG CGCGCACGCG CTGGGGCAGC
GCCAACACCG CAGGGGCCAT CCGCCTGAAC TGGCGGCTCA TGCAGCACAC GCCCGAGGTC
ATCGACTACG TGGTCGTGCA CGAGCTGTCC CACCTGCGCC ACATGGACCA CAGTCCGCGC
TTCTGGGCCA CGGTGGCCAG CGTGATGCCG GGCTGGGAGG CGCAGCGCCA GGTGCTGCGT
GACAAGCTGC TGCCGCCCTG GGAGTAG
 
Protein sequence
MANPAQRSWD WLLPPAVQTQ DGGLKPRRDR AAPPAQPPSA PPPSSAPSPS TIPEHSPRIH 
PEANQQAVLQ GQVLHYRLQR SRRRTIGFTI GAQGLVVSAP AWVNMAAIAQ ALEAKSGWIL
RKLHEAGQRQ QAQQAARIRW EHGAEIGYLG RPLQLCLTGG ETQPLRTRQV HREQAADGSQ
SLHLPLAPGA SAAEVRACVQ AWMLREARSW FTASLQRHAP LLGVQWTSLR LTSARTRWGS
ANTAGAIRLN WRLMQHTPEV IDYVVVHELS HLRHMDHSPR FWATVASVMP GWEAQRQVLR
DKLLPPWE