Gene Daci_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1290 
Symbol 
ID5746845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1437220 
End bp1437789 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID641296369 
Producthistidinol-phosphate phosphatase family protein 
Protein accessionYP_001562319 
Protein GI160896737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.291928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CGATCCTGGA CCGTGACGGA ACCCTCAACC AAATCGGTGA GGAGGGCTTC 
ATCGGCTCTG CCGAGGCCTG GAAGGCCCAG CGCGGGGCGC TGGAAGCCGT GGCGCGCCTG
AACCGGGCCG GCTGGCATGT GGTGGTCGCC ACCAACCAGC CGGGCCTGGG CCGGGGCCTG
TTCGACGTGA CCGAGCTCAA TGCCGTGCAC GCGCGCATGC ACCGCGAAAT GGCGGCGGCA
GGCGCGCGCG TCGATGCGGT TTTCTACTGC CCCCATGCGC CGGACGAAGA ATGCCATTGC
CGCAAGCCCG GCACGGCGCT GTTCGAGCAG ATTGCCGAGC GCTTCGGCGT CGAGGGGCAC
CAGCTGTGGG TCATCGGTTC CTGCGTGGCC CACCTGCAGG CCGGCGCCGC CATGGGCGCG
CGCCTGCACC TGGTCTGCAC GGGAGCCAGC GCCGGAGTGT CTCTGGACGG GGCGCTGCCG
CCCGGACTGC CGCCCGGCAC CCAGCGCCAT GCCAGCCTGG CCGCGCTGGC CGATGCGCTG
GTTCCGGCGG ATGCCGCACC CGCTCCCTGA
 
Protein sequence
MKIAILDRDG TLNQIGEEGF IGSAEAWKAQ RGALEAVARL NRAGWHVVVA TNQPGLGRGL 
FDVTELNAVH ARMHREMAAA GARVDAVFYC PHAPDEECHC RKPGTALFEQ IAERFGVEGH
QLWVIGSCVA HLQAGAAMGA RLHLVCTGAS AGVSLDGALP PGLPPGTQRH ASLAALADAL
VPADAAPAP