Gene Daci_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1266 
Symbol 
ID5746821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1409816 
End bp1410814 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID641296345 
ProductPGAP1 family protein 
Protein accessionYP_001562295 
Protein GI160896713 
COG category[R] General function prediction only 
COG ID[COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCAC GCATTCTGCA AATGGTGGCG CTGGGCACGC TGGCGGGCGC CGCGGCCTGG 
CTGGCATGGT GGTGGCCGCG TTCACCCGGG CTGGCGCTGG CGGGGGCGCT GCTGGGCCTG
TGCTGGCCGG GCCTGCACCT GGGCCTGCAG ATGCTGCTGA TGCGCCGCGT GGTGCGCAAG
GCGGGGGCAC CCGTGCCGTC ATGGCGCGCG GTGGCGGAGG CCTGGCTGGC CGAGTGGCGG
TTGGCCGTGC AGGTGTTTGG CTGGCGGCTG CCGTTTCGCG CCCGTGCCGA GGCCGATGGC
TTGCCTGACG GCGGCACCAC CGGCCAAGTG GGTGCGATGG GCCAGGTGGG CGTGGTGCTG
GTCCACGGGT TCTTCTGCAA CCGCGCGGTC TGGGCGCCCT GGCTGCGGCG GCTCAAGGAC
GGCGGCATTG CCTGCGCGGC CATGACGCTG GAGCCGGCGC ATGGCGCATC CATCGACGCC
ATGGTGGCCG ACCTTGACGC CTGCGCGCGC CGCATGGCCC AGGCCACGGG GCGCGCTCCG
CTGATCGTGG CGCACAGCAT GGGCGGCCTG GTGGTGCGGG CATGGCTGGG GCAACTGTCG
GCGCAGGAGC GCCCGCAACT GGCGGCCCAT GTGGTGACGC TGGCCACCCC GCACCGTGGC
ACCTGGATGG CGCGCTTCGC CCATGGCCTG CCGGCGCTGC AGATGCGCAC GGACAGCCCC
TGGTTGCAGC GCCTGGGGCC GCCCCCCTCG GACGTGCCCT TCAGCTGCTG GTGGAGCTGC
TGCGACAACA TCGTCTTTCC ATCGCCCGTG GCCACGCTGC CGGGGCAGGA TGCGCACCGC
CTGGACGATG TGGCCCACGT GCAGCTGGTG TTCGACGAGC GCGTCTGGCG CTTTTGCCTG
GCGCTGCGCG AGCGGCTTCA GGCTGCAGAT TCCTGCAGCG CCGATTCCTA CAGAGCGACC
TCGCCCGGCA GCAGCGCATC TGCCGCGACG GTGGGCTGA
 
Protein sequence
MNARILQMVA LGTLAGAAAW LAWWWPRSPG LALAGALLGL CWPGLHLGLQ MLLMRRVVRK 
AGAPVPSWRA VAEAWLAEWR LAVQVFGWRL PFRARAEADG LPDGGTTGQV GAMGQVGVVL
VHGFFCNRAV WAPWLRRLKD GGIACAAMTL EPAHGASIDA MVADLDACAR RMAQATGRAP
LIVAHSMGGL VVRAWLGQLS AQERPQLAAH VVTLATPHRG TWMARFAHGL PALQMRTDSP
WLQRLGPPPS DVPFSCWWSC CDNIVFPSPV ATLPGQDAHR LDDVAHVQLV FDERVWRFCL
ALRERLQAAD SCSADSYRAT SPGSSASAAT VG