Gene Daci_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1260 
Symbol 
ID5746815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1402612 
End bp1403370 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID641296339 
ProductexsB protein 
Protein accessionYP_001562289 
Protein GI160896707 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCA TGCAAAACGA TAGCTCTTCT CCCCAGGCGC CAGCGGCGCG CCACACGGCT 
GCGCTGGTCC TGTTTTCCGG CGGCCAGGAT TCGACCACCT GCCTGGCGCA GGCGCTGTCC
CTGTACGAGC GCGTCGAGAC CCTCGGTTTT GACTACGGCC AGCGCCACAG CGTGGAAATG
CAGGTACGCC AGCAGGTGCG CGAGCGGCTG TCCAGGGACT TTCCCCAATG GGCACCGCGC
CTGGGCGATG ACCATGTCCT CTCGCTGGAC GTGCTGCAAC AGATCGGCGG CTCCTCTCTG
ACCGAGGACG TGGCCTTCGC CATGCAGGCC GACGGCCTGC CCAACACCTT CGTGCCCGGC
CGCAACCTGC TGTTCCTGAC CCTGGCCGGC GCGCTGGCCT ACCGGCGCGG CCTGTCGGTG
ATCGTCACCG GCGTCTGCGA GACCGACTAC TCCGGCTACC CCGACTGCCG GGACGACACC
ATGAAGGCCA TGCAGCTCGC CCTGAACCTG GGCCTGGAGC GGCGCCTGCG CATCGAAACG
CCCCTGATGT GGATAGACAA GGCCCAAACC TGGCAAATGG CCCACGACCT GGGTGGCGAC
ACCCTGGTGG ACCTCATCCA GCGCGACACC CACACCTGCT ACCAGGGCAC GCGCGAGACG
CTGCACGACT GGGGCTACGG CTGCGGCACC TGCCCCGCCT GCGACCTGCG AGCCCGCGGC
TGGCATCAAT GGCAGGCGCA GCGCGAGACA GCAAACTAA
 
Protein sequence
MRAMQNDSSS PQAPAARHTA ALVLFSGGQD STTCLAQALS LYERVETLGF DYGQRHSVEM 
QVRQQVRERL SRDFPQWAPR LGDDHVLSLD VLQQIGGSSL TEDVAFAMQA DGLPNTFVPG
RNLLFLTLAG ALAYRRGLSV IVTGVCETDY SGYPDCRDDT MKAMQLALNL GLERRLRIET
PLMWIDKAQT WQMAHDLGGD TLVDLIQRDT HTCYQGTRET LHDWGYGCGT CPACDLRARG
WHQWQAQRET AN