Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1243 |
Symbol | |
ID | 5746798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1386737 |
End bp | 1388464 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296322 |
Product | ABC transporter related |
Protein accession | YP_001562272 |
Protein GI | 160896690 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGA CACAAGAATC CGGGCAGCCC CCTGCACAGC CTGCGGTGCT GAGCGTTCGC GGCCTGTCCG TCACCTTCGA CACCTACAAG GGCCCCGTGC AGGTGCTGGA CGATGTGAGC TTCGACATCG CGCCCGGCGA GATCCTGGGC GTGGTGGGCG AGTCGGGCGC GGGCAAGTCC ATGACGGGCG CCGCCGTGAT CGGCCTGATC GAGCCGCCGG GCCGCATCTC GGCCGGCACG GTGCAGCTGC GCGGCGAGCG CATCGACACG CTGCGCGGCG AGGACCTGCG GCGCATACGC GGCCGGCGCA TAGGCTCCAT CTTCCAGGAC CCGCTGACCA GCCTGAACCC GGTCTACACC GTGGGCTGGC ACCTGGTGGA GACCATCCGC ACGCATCTGC CCGTCTCCGA GAAGGAGGCC GAAGCCCGCG CGCTGGCCCT GCTCGAAGAG GTGGAGATCC CGCAGGCGCG CGAGCGCATG GCCCAGTATC CGCACCAGTT CTCGGGCGGC ATGCGCCAGC GCGTGGCCAT CGCCCTGGCG CTGTGCGCCG AGCCCGAGCT CATCATTGCC GACGAGCCCA CCACGGCGCT GGACGTGTCC GTGCAGGCGC AGATCATTGC CCTGCTGCGC CGTGTGTGCA AGGAGCGCGG CGCGGCCGCC ATGCTGATCA CGCACGATAT GGGCGTGATC GCCGAGACGG CCGACCGCGT CATGGTCATG TACCAGGGCC GCGTGCTGGA AACCGGCCCC GTGCGCCAGG TGCTGGACGC ACCGCAGCAG CCCTACACCC AGGTGCTGAT GGGCGCCATT CCCAGCGTGC ACCACCGCGT GCAGCGCCTG CCCGTGCCCG AGGTGGGCGG CGGCCCGGCC GCGCCCGCCG TGCCCTGGCA GCCCAGGGCC GGAGCGCAGG AGCCCGCGGC TGCCCTGCTG GAGGTCAGGG ATCTGTGCAA GGAGTTCGAC CTGTCCAGCG GCTGGCTGGC CCGTCTGCTG GCGCGCGAGG ACAAAAAAAT CCTCAAGGCC GTGGACGGCG TCGGCTTTTC GATCCGCAGG GGCTCCACCT TCGGCCTGGT CGGCGAGTCC GGCTCGGGCA AATCCACGGT GGCGCGCATG GTGGCCGGGC TGACGCCCCC GACCAGCGGC ACCGTGCTGT TCGACGGCGT GGACAAGTGG AGCCCGGCCG CCCAGACCGT GGCCATGCGC CGGCGCTTCC AGATGATCTT CCAGGACCCG TATGCCAGCC TGAACCCGCG CTGGACCGTG CAGGAACTGA TTGCCGAGCC CCTGCAGGTG CTGGCCCTGA CGGCCGGCAA GGACGAGACG GCCGAGCGCG TGCAGGAGGC GCTGCGCCGC GTGCGCATGA AGCCCGACGA TGCGCGCAAG TACCCGCACC AGTTCTCGGG CGGGCAGCGC CAGCGCATCG CCATCGCGCG CGCCCTGGCC AGCCGGCCCG AATTCATCAT CTGCGACGAG CCCACCTCGG CGCTGGACGT CTCGGTCCAG GCCCAGGTGC TCAACCTCAT GCGCGACCTG CAGGAGGAGT TCGGCCTGAC CTATCTGCTG ATCAGCCACA ACCTGGCTGT GATCCGCCAC ATGTGCGACG ACATCGGCGT CATGCAGCGC GGCCGCTTGG TCGAGACCGG CGAGGCCGGC GCCGTGCTCG ATGCACCGCA GCATGCATAC ACGCGCGCGC TGATGGCTGC CGTGCCTGAT ATGGAGCATG TGCACTGA
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Protein sequence | MSTTQESGQP PAQPAVLSVR GLSVTFDTYK GPVQVLDDVS FDIAPGEILG VVGESGAGKS MTGAAVIGLI EPPGRISAGT VQLRGERIDT LRGEDLRRIR GRRIGSIFQD PLTSLNPVYT VGWHLVETIR THLPVSEKEA EARALALLEE VEIPQARERM AQYPHQFSGG MRQRVAIALA LCAEPELIIA DEPTTALDVS VQAQIIALLR RVCKERGAAA MLITHDMGVI AETADRVMVM YQGRVLETGP VRQVLDAPQQ PYTQVLMGAI PSVHHRVQRL PVPEVGGGPA APAVPWQPRA GAQEPAAALL EVRDLCKEFD LSSGWLARLL AREDKKILKA VDGVGFSIRR GSTFGLVGES GSGKSTVARM VAGLTPPTSG TVLFDGVDKW SPAAQTVAMR RRFQMIFQDP YASLNPRWTV QELIAEPLQV LALTAGKDET AERVQEALRR VRMKPDDARK YPHQFSGGQR QRIAIARALA SRPEFIICDE PTSALDVSVQ AQVLNLMRDL QEEFGLTYLL ISHNLAVIRH MCDDIGVMQR GRLVETGEAG AVLDAPQHAY TRALMAAVPD MEHVH
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