Gene Daci_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1181 
Symbol 
ID5746736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1317471 
End bp1318121 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID641296261 
ProductUreE urease accessory domain-containing protein 
Protein accessionYP_001562211 
Protein GI160896629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2371] Urease accessory protein UreE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.180188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG TCAACAAACA CATGCCCCAG GGCGGCGGCC TTGCCGCCGT GCTGGTCAGG 
CGCGCCGCCA CGCTGGAACT GGACTGGGAC ATGCGCCAGA AGAGCCGCTT TGCGGCAACG
GACTCCACGG GGCGCGAGCT GGCCGTGGTG CTGGCGCGCG GCAGCGTGCT GCGCGGCGGC
GATGTGCTGG TGGCCGAGGA TGGCAGCCTG GTCGCCGTGC GCGCGGCGCC CCAGGCGGTG
TTGCGCGTGA CGGCGGCCAC GCCGCTGGGC CTGCTGCGTG CGGCCTACCA CCTGGGCAAC
CGGCATATCC CGGTGGAGGT CACCCCCACC CACCTGCACC TGGAAAACGA CCCCGTGCTG
CACGACATGC TGCTGCGCCT GGGCGCGCAG GTGGCCCTGG TGGATGCGCC CTTCGAGCCC
GAGGCCGGTG CCTATGGCGG CGGCCACCGC CACGGCCATG ACGCCAGCTT TGCCGAGGAC
CAGGCACTGG CACAGAGCGT GTATGCGCTG CATGATCATG GGCACGCACA CGGCCATTCC
CACGATCATT CCCACGGGCA TGAACATGGC CACGATCACA GCCATGACCA TGACCATGAT
CACAAAGGCT GCTGCGGACA CGGGCACGGC CACGACCATC CGCATGGCTG A
 
Protein sequence
MLTVNKHMPQ GGGLAAVLVR RAATLELDWD MRQKSRFAAT DSTGRELAVV LARGSVLRGG 
DVLVAEDGSL VAVRAAPQAV LRVTAATPLG LLRAAYHLGN RHIPVEVTPT HLHLENDPVL
HDMLLRLGAQ VALVDAPFEP EAGAYGGGHR HGHDASFAED QALAQSVYAL HDHGHAHGHS
HDHSHGHEHG HDHSHDHDHD HKGCCGHGHG HDHPHG