| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1173 |
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| Symbol | |
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| ID | 5746728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1305298 |
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| End bp | 1307523 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296253 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001562203 |
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| Protein GI | 160896621 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA TCCAACAAAT CCTCCCCCCC GCGAACGTCA CGCAGCTGGC CCTTGCCGCT
GCCCTGTGCC TCGCGGGCAC CTCGGCCTTC GCGCAGACCA GCACCACGCT GGGCACCGTG
AACGTGACGT CTTCGAGCGA AGCGCCCGTC AAGACCGACA ACGCCTCCTC GGCCAAGTTC
ACGGCCCCGC TGGTGGACAC GCCCAAGACG GTGCAGGTCA TCAACGAGGA AATCATCAAG
CAGACCGGCG CGACCAGCCT GCAGGAAGCC CTGCGGTCCA CGCCCGGCAT CACCTTCGGC
AACGGCGAAG GCGGCAACCC CTCGGGTGAC CAGCCCTTCA TCCGCGGCAT GGATGCCCAG
GCCAGCACCT TCGTGGACGG CATGCGCGAC ATTGCGGCCG GCACGCGCGA GGTGTTCAAC
CTGGAAGCGG TGGAAGTCAT CAAGGGCGCC GATTCGGCCT ACGCAGGCCG TGGCGGCGCT
GGCGGCTCCA TCAACCTGGT GACCAAGAAG GCCAGGAACG AGAACTTCAT CACCGGCGAC
GTGGGCCTGG GCACGGACAG CTACCGGCGC GCCACCATCG ACGCCAACCG CGTGCTGGGC
GAAGGCGTGG GCCTGCGCCT GAACGCCATG GTGCACGACG CCGACGTTCC CGGCCGCAGC
GGCCCCGAGA ACAAGCGCTG GGGCATTGCC CCCACGGTGA CCTTCGGCAT GGGCACGCCC
ACCGAGGTCT CGCTGTCCTG GCAGCACCTG CAGACCGACA ACATTCCCGA TGGCGGCGTG
CCCTACCTGT ACAGCAGCAC GGCTGCGGCC GGCCTGCGCG GCGGCAGCGT GGTGCGTCCC
ACCTACGGCA ACAGCCGCGA CAACTGGTAC GGCCTGACCA GCCGCGACTA CGAAAAGGAA
AAGAGCGACC TGTTCACGGC CACCGTGGAA CACAAGTTCA CCGACACCCA GAAGTTCCGC
AACAGCCTGC GCTACAGCAA GACCGAACAG GACTACCTTT GGACCCAGCC CGACGACAGC
AAGGGCAATG TCGTCAATGG CTATGTGTTC CGCCGAGGCA ATGCACGCGT GGCCGACATC
AAGACGCTGC AGAACCTCTC GGAATTCACG GGCAAGGCCC AGACCGGCAG CGTGGGCCAC
AGCTACGCCT TCGGCCTGGA ACTGTCCAAG GAAAAGGCCG AGTCCCGCAC CGCCGCGCTG
CAAACCACCA ACACCACCTG CACGGCCGCC AGCCTGTGGT GCGCCTCGCT GAACAACCCC
GACAGCAGCC CGCTGTGGAA CCTGCCCGTG ACGCTGGGCG ACCCCAGCCA CAACCAGATC
GACACCGTGG CGCTGTACGG CTTCGACACG CTGAAGTTCA ACGACCAGTG GCTGCTCAAT
GCCGGCCTGC GCATGGACCA CTACAAGATC AGCTCCTCCG GCCCCGCCGG CCGCACCACG
CCGGCCTATG ACCTGAGCCG TTCGGACACA TTGTTCAACT ACCAGCTGGG CCTGGTCTAC
AAGCCGGCCA CCAACGGCAG CATCTACGCC AGCATCGGCA CCTCCTCGCG CCCCGGCGGC
TCCATGCTGG GCAACGGCAA CGAGGACCTG GGCATCTCCA CCGACCAGCT GGCCAACCTA
GCTCCCGAGA AGACCCGCTC GCTGGAGCTG GGCACCAAGT GGGACCTGAT GGAAAAGCGC
CTGGCGCTGA CGGCCGCGCT GTTCCGCAAC GACGTGACCA ATGCGCGCAT CACCGAAAAC
GGCGTCACCT ACATGGGCGG CAACAAGGTG GTCAACGGCG TGGAACTGGG CTTCACGGGC
AGCGTGCTGC CGGGCCTGAG CGTCTTCGGC GGCTACACCT ACATGGACAG CGAGCAGAAG
AACGCAGGCG CTGGCAGCGT GGCCAATGGC CAGCCCTTCC CCAACACGCC CAAGCACAGC
TTCAGCCTGT GGACCAGCTA CAAGCCCATG GCAAAGCTGA CCTTGGGCCT GGGCATCTAC
GCCCAGAGCA GCGTGAACCA GAGCTACATC CTGTCCACGG TGGATGGCGG CATCGTCACC
AAGGGCGCCA GCGGCTATGC GCGCTACGAC GCCATGGTGG CCTACCAGAT CGACCGCAAC
CTGACCGTGC AGCTGAACCT GTACAACCTG GGCGACAAGG TCTACTACAG CGGCATCCGC
TCGCCCCACT ACGCGACCAT GGCCGCAGGC CGCTCGGCCG TGGCCTCGCT CAAGTGGACG
TACTGA
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| Protein sequence | MSKIQQILPP ANVTQLALAA ALCLAGTSAF AQTSTTLGTV NVTSSSEAPV KTDNASSAKF
TAPLVDTPKT VQVINEEIIK QTGATSLQEA LRSTPGITFG NGEGGNPSGD QPFIRGMDAQ
ASTFVDGMRD IAAGTREVFN LEAVEVIKGA DSAYAGRGGA GGSINLVTKK ARNENFITGD
VGLGTDSYRR ATIDANRVLG EGVGLRLNAM VHDADVPGRS GPENKRWGIA PTVTFGMGTP
TEVSLSWQHL QTDNIPDGGV PYLYSSTAAA GLRGGSVVRP TYGNSRDNWY GLTSRDYEKE
KSDLFTATVE HKFTDTQKFR NSLRYSKTEQ DYLWTQPDDS KGNVVNGYVF RRGNARVADI
KTLQNLSEFT GKAQTGSVGH SYAFGLELSK EKAESRTAAL QTTNTTCTAA SLWCASLNNP
DSSPLWNLPV TLGDPSHNQI DTVALYGFDT LKFNDQWLLN AGLRMDHYKI SSSGPAGRTT
PAYDLSRSDT LFNYQLGLVY KPATNGSIYA SIGTSSRPGG SMLGNGNEDL GISTDQLANL
APEKTRSLEL GTKWDLMEKR LALTAALFRN DVTNARITEN GVTYMGGNKV VNGVELGFTG
SVLPGLSVFG GYTYMDSEQK NAGAGSVANG QPFPNTPKHS FSLWTSYKPM AKLTLGLGIY
AQSSVNQSYI LSTVDGGIVT KGASGYARYD AMVAYQIDRN LTVQLNLYNL GDKVYYSGIR
SPHYATMAAG RSAVASLKWT Y
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