Gene Daci_1160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1160 
Symbol 
ID5746715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1290585 
End bp1291313 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID641296240 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001562190 
Protein GI160896608 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAAG AACTGTCACT GCACCAGCGC CGCCGCGCGC CCCGGCCCGA GGAACTCGAA 
GGCATTCCCT GGCTGGCCGT ACTCCAGCCC GCCGAGCGCG AACGGGCCCA GAAGGCGCTG
GTCGTCGGCG ACGCCCAGCC CGGCGACTAT GTCTGCCGCA CCGGCCGCGC GCCCACCTAC
TGGTTCGGCG TGGTCGAAGG CCTGCTCAAG ATGAACACCG ACGGCGCCGA TGGTGCCAGC
ATGACCCTGG CCGGCCTGCC CCCGGGCGGC TGGTTCGGCG AAGGCACGGC CGTCAAGCGC
GAGCCCTACC GCTACAACGT GCAGGCCATA CGCCGCAGCG TGGTCGGTGG CTTGCCGATC
GAGACCTTCC ACTGGCTGCT GGACCACTCC ATCGGTTTCA ACCGCTTCGT CATGAGCCAG
CTCAACGAGC GCCTGGGCCA GTTCATCTCG GCCCGCGAAA TCGACCGCCT CACCAACCCC
GACCTGCGCG TGGCCCGCAG CCTGGCCGCG CTCTTTCACC CACTGCTGTA CCCGGGCGTG
GGCGAGGTGC TGCGCATCAC CCAGCAGGAG CTGGCCTACC TGGTGGGCCT GTCGCGCCAG
CGCGTCAACG AGGCGCTGTC CGTGCTGCAG CGCGAAAACG CCATTGTCGT GGAGTACGGC
GGCCTGCGCG TGCTCGACCT GGAAGCGCTG CGCAGCGGGC TGTTTGCGGC GGCGCGGCGG
GCGGCTTGA
 
Protein sequence
MSQELSLHQR RRAPRPEELE GIPWLAVLQP AERERAQKAL VVGDAQPGDY VCRTGRAPTY 
WFGVVEGLLK MNTDGADGAS MTLAGLPPGG WFGEGTAVKR EPYRYNVQAI RRSVVGGLPI
ETFHWLLDHS IGFNRFVMSQ LNERLGQFIS AREIDRLTNP DLRVARSLAA LFHPLLYPGV
GEVLRITQQE LAYLVGLSRQ RVNEALSVLQ RENAIVVEYG GLRVLDLEAL RSGLFAAARR
AA