Gene Daci_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1141 
Symbol 
ID5746696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1269573 
End bp1270097 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content72% 
IMG OID641296221 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001562171 
Protein GI160896589 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.935538 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCCG CACCCACGAC GCCGCCTTCC ATGACGCCCA TGACGCCCCT GACCGACGAA 
CAGGCCGCCC GCCAGCTGCG CCGCGCAGGC GCCGTGGCCG GGCGGGCCAT GGCCATGGGT
CGCCACCCCT TTGGCGCGCT GCTGCTGGCG CCCGACGGCG AGACCGTGCT GGCCGAGCAG
GGCAACATCG ACACGGTGAA CCATGCCGAG TCCACGCTGG CGCGCACGGC GGCCGCCAAC
TATCCGGGTG CCTACCTGGC GCAGTGCACC CTGGTCACCA CCTTCGAGCC CTGCGCCATG
TGCGCCGGAA CCATCTACTG GGCCGGCATA GGCCGTGTGC TCTACGGCGC CGAGGAAACG
GCGCTGCTGG CGCTGACGGG CGACCATCCC GAAAATCCCA CGCTGTCCCT GCCTTGCCGC
GAGGTCTTCG CGCGCGGGCA GCGCGCCGTG CAGGTCATCG GCCCGGTGCC TGCGCTGCAC
GAGGAGATGC TGGAGCCGCA CCGGGGCTTC TGGCAGCAGC GCTGA
 
Protein sequence
MTPAPTTPPS MTPMTPLTDE QAARQLRRAG AVAGRAMAMG RHPFGALLLA PDGETVLAEQ 
GNIDTVNHAE STLARTAAAN YPGAYLAQCT LVTTFEPCAM CAGTIYWAGI GRVLYGAEET
ALLALTGDHP ENPTLSLPCR EVFARGQRAV QVIGPVPALH EEMLEPHRGF WQQR