Gene Daci_1063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1063 
Symbol 
ID5746618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1173775 
End bp1174383 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID641296143 
Productphosphoheptose isomerase 
Protein accessionYP_001562093 
Protein GI160896511 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.275691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGC AACGTATCCA ACAGCATTTC ATCGACAGCG CCGACCTGAA ATACCAGGCC 
GCCCAGGCGC TGAGCCAGCC CATTGCGGCG GCGGTGCAGG CCATGCTGGC CTGCGTGACC
AGTGGCGGCA AGGTTCTGGC CTGCGGCGCA GGCGCCTCTG CCAGCGATGC CCAACTCTTC
GCCGCCCTGT GCGTGGCCGG CTTCGAACGC GACCGGCCCG AGCTGGCTGC CGTGGCCCTG
GTCTCCGACG GCGGCCTGCT GGGCACCGTG GGCGCCACGG GCTCGGGCGG CAACGCCACC
CAGTACCTGG CGCGCCAGAT ACGCGCCCTG GGCCAGCCCG GCGACCTGCT GCTGGTGCTG
TCCGCCACGG GCAACGACGT GGCCGTGCTG GAGGCGCTGG ATGCCGCCCA TGAGCGCGAC
ATGATGGCCG TGGTGCTGAC CGGCCGCACG GGCGGCTCCC TGGCCGGCCG CGTGCGCGAG
ACCGATGTTC TGATCTGCGT GCCGCACGAC CGTGCGGCGC GCGTGCGCGA AACCCATACG
CTGGTGCTGC ACTGCCTGTG CGACGGCGTG GATGCCCAGT TACTTGGTGA ACAGGAGATG
CCTCTATGA
 
Protein sequence
MLEQRIQQHF IDSADLKYQA AQALSQPIAA AVQAMLACVT SGGKVLACGA GASASDAQLF 
AALCVAGFER DRPELAAVAL VSDGGLLGTV GATGSGGNAT QYLARQIRAL GQPGDLLLVL
SATGNDVAVL EALDAAHERD MMAVVLTGRT GGSLAGRVRE TDVLICVPHD RAARVRETHT
LVLHCLCDGV DAQLLGEQEM PL