Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1063 |
Symbol | |
ID | 5746618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1173775 |
End bp | 1174383 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296143 |
Product | phosphoheptose isomerase |
Protein accession | YP_001562093 |
Protein GI | 160896511 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0279] Phosphoheptose isomerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.275691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTTGAGC AACGTATCCA ACAGCATTTC ATCGACAGCG CCGACCTGAA ATACCAGGCC GCCCAGGCGC TGAGCCAGCC CATTGCGGCG GCGGTGCAGG CCATGCTGGC CTGCGTGACC AGTGGCGGCA AGGTTCTGGC CTGCGGCGCA GGCGCCTCTG CCAGCGATGC CCAACTCTTC GCCGCCCTGT GCGTGGCCGG CTTCGAACGC GACCGGCCCG AGCTGGCTGC CGTGGCCCTG GTCTCCGACG GCGGCCTGCT GGGCACCGTG GGCGCCACGG GCTCGGGCGG CAACGCCACC CAGTACCTGG CGCGCCAGAT ACGCGCCCTG GGCCAGCCCG GCGACCTGCT GCTGGTGCTG TCCGCCACGG GCAACGACGT GGCCGTGCTG GAGGCGCTGG ATGCCGCCCA TGAGCGCGAC ATGATGGCCG TGGTGCTGAC CGGCCGCACG GGCGGCTCCC TGGCCGGCCG CGTGCGCGAG ACCGATGTTC TGATCTGCGT GCCGCACGAC CGTGCGGCGC GCGTGCGCGA AACCCATACG CTGGTGCTGC ACTGCCTGTG CGACGGCGTG GATGCCCAGT TACTTGGTGA ACAGGAGATG CCTCTATGA
|
Protein sequence | MLEQRIQQHF IDSADLKYQA AQALSQPIAA AVQAMLACVT SGGKVLACGA GASASDAQLF AALCVAGFER DRPELAAVAL VSDGGLLGTV GATGSGGNAT QYLARQIRAL GQPGDLLLVL SATGNDVAVL EALDAAHERD MMAVVLTGRT GGSLAGRVRE TDVLICVPHD RAARVRETHT LVLHCLCDGV DAQLLGEQEM PL
|
| |