| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1044 |
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| Symbol | rpsM |
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| ID | 5746598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1156011 |
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| End bp | 1156376 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641296123 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001562074 |
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| Protein GI | 160896492 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCTGGCAT TAACATCCCG CCGCATCAGC ACGCTGAAAT CGGCCTGACC
GCTATCTATG GGATCGGTCG CACCACTGCA CGCAAGATCT GCGAAGCCGC TGGCATCGCA
TATTCCAAGA AAATCAAGGA ACTGACTGAC GGTGATCTGG AAAAGATCCG TGATCAGCTG
ACTTCCCTGA CTCTGGAAGG TGATCTGCGT CGCGAAACAA CGATGAACAT CAAGCGTTTG
ATGGACATCG GTTGCTATCG CGGTTTCCGT CATCGTCGTG GCCTGCCCAT GCGTGGTCAA
CGTACCCGCA CGAATGCACG TACCCGCAAG GGTCCGCGCA AGGGTGCCGC GGCTTTGAAG
AAATAA
|
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| Protein sequence | MARIAGINIP PHQHAEIGLT AIYGIGRTTA RKICEAAGIA YSKKIKELTD GDLEKIRDQL
TSLTLEGDLR RETTMNIKRL MDIGCYRGFR HRRGLPMRGQ RTRTNARTRK GPRKGAAALK
K
|
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