Gene Daci_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1022 
Symbol 
ID5746576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1137658 
End bp1138863 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID641296102 
Producthypothetical protein 
Protein accessionYP_001562053 
Protein GI160896471 
COG category[S] Function unknown 
COG ID[COG4222] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.924972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTGGC CCAGACTGCG CTGGCGGCCT GACAACGGGC TCACGGCCTT GTTCAAGGCG 
GCCAGCCTGG TGCTTTCCGG CCTGCTGCTG GCCGGCTGCG CCGCGCCGCC CCAGGCCCTG
CCGGCCCCGC AGCCCACGGC ATGTGCGCGC CTGCAATGGC TGGGCAGCAC CACGATTGCG
CGCGATGAAC CCATCCATGG CGCCACCACC GGCGGCATCT CGGGCCTGAA CTATGACGCC
CGGCGCGGCG ACTTCGTGGC CATCAGCGAT GACCGCTCGG CGCGCGGCCC CGCGCGCTGG
GTGCGCCTGC GCATAGAGCA GCTGGACGCG GGCCAGCGCG CCGGCCCCAA CCCCTGGCAG
GCGCAGGTCA CCGAAGTGCA TCCGCTGCTG GATGCCGAGG GCCGCTGGCT GCGCCCGCGC
CATGCCGCGC CCGCCACCCA GCCCGTGCCC GACCCCGAAG CCATCCGCCT GCTGCCGGAC
GGCGGCCTGC TGTGGACCGA TGAAGGCGAC CCGGGCCGGG GCTTTGGCAC CTCGCTGGTG
AGGACCGACG CCACGGGCCG CCAGATCGCG CGGTGGTTCT ACGCATTCAA GGACGAGGAC
GGCAGGCCGG GCCTGCGCTC GAACTTCGGC TTCGAGGGGC TGGCCGTCAC GCCGGACGGC
CAACAGGCCT GGCTGGCCCT GGAAGCGCCG TTGCGCCAGG ACGGCCCGCG CGCCAGCGCC
GCCACGGCAG GCGCGCCCGT GCGCATCAGC CTCGTCAGCC TGGACGACGG CCGGCTGCTG
CGCCAGATCG CCTACCAGCC CGATGCCGTG CCGGCCGCCA GCTGGGCCCT GCCCCAACGC
GAGGTCAACG GCATCAGCGA GATCCTGCCG GACGGACCCG ACCATCTGCT GGTGCTGGAG
CGCTCCTACA GCCCGGGCCA CGGCTTTGGC GCGCGGCTGT ACCGCATCGG CCTGGATGCG
CCTGGCACGC TGGCCCTGGC CAGCTTCGCG CAAACGCCGC CACAAGTGGC CGTCAAGCAA
CTGGTGGCCG ATCTGTCCAC CGTGCAGCCC GGCCGGCTGG ACAACATGGA AGCCATGTCC
TGGGGCCCGC CGCTGCCCGA CGGCACCCGC GTGCTGGTGT TCGCCAGCGA CGACAACTTC
AACCCGGCGC AGGCCAACCA GATCCTGATC ACCGCCTACC GGCCCTCGCC GCCCTGCGCA
CCCTGA
 
Protein sequence
MRWPRLRWRP DNGLTALFKA ASLVLSGLLL AGCAAPPQAL PAPQPTACAR LQWLGSTTIA 
RDEPIHGATT GGISGLNYDA RRGDFVAISD DRSARGPARW VRLRIEQLDA GQRAGPNPWQ
AQVTEVHPLL DAEGRWLRPR HAAPATQPVP DPEAIRLLPD GGLLWTDEGD PGRGFGTSLV
RTDATGRQIA RWFYAFKDED GRPGLRSNFG FEGLAVTPDG QQAWLALEAP LRQDGPRASA
ATAGAPVRIS LVSLDDGRLL RQIAYQPDAV PAASWALPQR EVNGISEILP DGPDHLLVLE
RSYSPGHGFG ARLYRIGLDA PGTLALASFA QTPPQVAVKQ LVADLSTVQP GRLDNMEAMS
WGPPLPDGTR VLVFASDDNF NPAQANQILI TAYRPSPPCA P