Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0971 |
Symbol | |
ID | 5746525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 1082087 |
End bp | 1083229 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641296051 |
Product | alanine racemase domain-containing protein |
Protein accession | YP_001562002 |
Protein GI | 160896420 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGACA CACTTCTGAC CCTGGACACG CCCGCTGCCG TGATCGACCT CGACCGCATG CAGCGCAACA TCGCCCGCAT GCAGCAGCGC ATGGACGCGC AGGGCGTGCG CCTGCGCCCC CATGTGAAGA CCAGCAAGAG CGTGCCCGTG GCCGCCGCGC AGCGTGCGGC AGGGGCCTCG GGCATCACGG TCTCCACCCT GAAGGAGGCC GAGCAGTTCT TTGCGGCTGG CACCACCGAC ATCCTCTATG CAGTCAGCAT GGCGCCGCAC CGCCTGCCGC AGGCCCTGCA ACTGCGCCGG CGCGGCTGCG ACCTCAAGCT CATCGTGGAC AGCGTGGCTG CGGCCCAGGC CATTGCCGCG TTCGGCGGCG AGCAGGGCGA GGCCTTCGAG GTGTGGATAG AGATCGACAC CGACGGCCAC CGCTCTGGCG TGGGCGCAGA CGATACGCCG CTGCTGCTGG CCATTGGCCG CACGCTGCAC GACGGCGGCA TGCGCCTGGG CGGCGTGCTC ACGCATGCGG GCTCCAGCTA CGAGCTGGAC ACGCCCGAGG CGCTGCAGGC CCTGGCCGAA CGCGAGCGCG CCGGCTGCGT GCAGGCTGCC GAGGCCCTGC GCGCGGCCGG CCTGCCGTGC CCCGTGGTCA GCGTGGGCTC CACGCCCACG GCGCTGGCGG CCAGCCGGCT GGACGGCGTG ACCGAGGTGC GCGCAGGCGT CTACGTGTTC TTCGACCTGG TGATGCGCAA CATCGGCGTG TGCACGGCCG AGGACGTGGC GCTGTCGGTG CTGGCCACCG TGATCGGCCA CCAGGCCGAC AAGGGCTGGG CCATCGTGGA TGCGGGCTGG ATGGCCATGA GCCGCGACCG CGGAACGGCC CGGCAGAAAC AGGATTTCGG CTACGGCCAG GTCTGCGACC TGCAGGGGCG GGTGATGCCG GGCTTCGTTC TCACGGGCGC CAACCAGGAG CACGGCATCC TGGCCCGGGC CGATGGCACG GCGGAGGCCG ACATCGCCAC GCGCTTTCCC CTGGGCACGC GGCTGCGCAT CCTGCCCAAC CATGCCTGCG CCACGGGCGC GCAGTTCCCG GCCTACCAGG CGCTGGCGGC AGATGGCTCG GTGCAAACCT GGGAGCGGCT CCATGGCTGG TGA
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Protein sequence | MQDTLLTLDT PAAVIDLDRM QRNIARMQQR MDAQGVRLRP HVKTSKSVPV AAAQRAAGAS GITVSTLKEA EQFFAAGTTD ILYAVSMAPH RLPQALQLRR RGCDLKLIVD SVAAAQAIAA FGGEQGEAFE VWIEIDTDGH RSGVGADDTP LLLAIGRTLH DGGMRLGGVL THAGSSYELD TPEALQALAE RERAGCVQAA EALRAAGLPC PVVSVGSTPT ALAASRLDGV TEVRAGVYVF FDLVMRNIGV CTAEDVALSV LATVIGHQAD KGWAIVDAGW MAMSRDRGTA RQKQDFGYGQ VCDLQGRVMP GFVLTGANQE HGILARADGT AEADIATRFP LGTRLRILPN HACATGAQFP AYQALAADGS VQTWERLHGW
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