Gene Daci_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0971 
Symbol 
ID5746525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1082087 
End bp1083229 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content71% 
IMG OID641296051 
Productalanine racemase domain-containing protein 
Protein accessionYP_001562002 
Protein GI160896420 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACA CACTTCTGAC CCTGGACACG CCCGCTGCCG TGATCGACCT CGACCGCATG 
CAGCGCAACA TCGCCCGCAT GCAGCAGCGC ATGGACGCGC AGGGCGTGCG CCTGCGCCCC
CATGTGAAGA CCAGCAAGAG CGTGCCCGTG GCCGCCGCGC AGCGTGCGGC AGGGGCCTCG
GGCATCACGG TCTCCACCCT GAAGGAGGCC GAGCAGTTCT TTGCGGCTGG CACCACCGAC
ATCCTCTATG CAGTCAGCAT GGCGCCGCAC CGCCTGCCGC AGGCCCTGCA ACTGCGCCGG
CGCGGCTGCG ACCTCAAGCT CATCGTGGAC AGCGTGGCTG CGGCCCAGGC CATTGCCGCG
TTCGGCGGCG AGCAGGGCGA GGCCTTCGAG GTGTGGATAG AGATCGACAC CGACGGCCAC
CGCTCTGGCG TGGGCGCAGA CGATACGCCG CTGCTGCTGG CCATTGGCCG CACGCTGCAC
GACGGCGGCA TGCGCCTGGG CGGCGTGCTC ACGCATGCGG GCTCCAGCTA CGAGCTGGAC
ACGCCCGAGG CGCTGCAGGC CCTGGCCGAA CGCGAGCGCG CCGGCTGCGT GCAGGCTGCC
GAGGCCCTGC GCGCGGCCGG CCTGCCGTGC CCCGTGGTCA GCGTGGGCTC CACGCCCACG
GCGCTGGCGG CCAGCCGGCT GGACGGCGTG ACCGAGGTGC GCGCAGGCGT CTACGTGTTC
TTCGACCTGG TGATGCGCAA CATCGGCGTG TGCACGGCCG AGGACGTGGC GCTGTCGGTG
CTGGCCACCG TGATCGGCCA CCAGGCCGAC AAGGGCTGGG CCATCGTGGA TGCGGGCTGG
ATGGCCATGA GCCGCGACCG CGGAACGGCC CGGCAGAAAC AGGATTTCGG CTACGGCCAG
GTCTGCGACC TGCAGGGGCG GGTGATGCCG GGCTTCGTTC TCACGGGCGC CAACCAGGAG
CACGGCATCC TGGCCCGGGC CGATGGCACG GCGGAGGCCG ACATCGCCAC GCGCTTTCCC
CTGGGCACGC GGCTGCGCAT CCTGCCCAAC CATGCCTGCG CCACGGGCGC GCAGTTCCCG
GCCTACCAGG CGCTGGCGGC AGATGGCTCG GTGCAAACCT GGGAGCGGCT CCATGGCTGG
TGA
 
Protein sequence
MQDTLLTLDT PAAVIDLDRM QRNIARMQQR MDAQGVRLRP HVKTSKSVPV AAAQRAAGAS 
GITVSTLKEA EQFFAAGTTD ILYAVSMAPH RLPQALQLRR RGCDLKLIVD SVAAAQAIAA
FGGEQGEAFE VWIEIDTDGH RSGVGADDTP LLLAIGRTLH DGGMRLGGVL THAGSSYELD
TPEALQALAE RERAGCVQAA EALRAAGLPC PVVSVGSTPT ALAASRLDGV TEVRAGVYVF
FDLVMRNIGV CTAEDVALSV LATVIGHQAD KGWAIVDAGW MAMSRDRGTA RQKQDFGYGQ
VCDLQGRVMP GFVLTGANQE HGILARADGT AEADIATRFP LGTRLRILPN HACATGAQFP
AYQALAADGS VQTWERLHGW