Gene Daci_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0919 
Symbol 
ID5746473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1030093 
End bp1031109 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content70% 
IMG OID641295999 
Productpirin domain-containing protein 
Protein accessionYP_001561950 
Protein GI160896368 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.200809 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGCTG CGCCGCGCTG CACGACACTG GTGGCTTCCC CCACGAAACA GGCCGATCCG 
ACCATGTCCG ACACGTCCCA GCCCCACTCC CAACCCCAGC ACCTGCCCAC CCGCACCGCC
GATGTGGGCG GCATTCCCAT CCAGCGCGCC ATTCCCCAGC GCGCCCTGCG CAAGGTCGGC
GCCTGGTGCT TTCTCGATCA CGCCGGTCCT GCCGACCCCG CGCCACCGGG CATGCAGGTC
GGCCCGCATC CGCACATCGG CCTGCAGACC TTCACCTGGA TGATCCGCGG CGAAGTGCTG
CACCGCGACA GCCTGGGCCA CACCCAGATC ATCCGCCCCG GCCAGGTCAA CCTGATGACG
GCCGGCCACG GCATCGCCCA CTCCGAGGAA AGCCAGACGC CCTCGCACAT CCACGCCGCG
CAGCTGTGGA TTGCGCTGCC CGAGTCGCAC CGCAACGGTC CGCCGCGCTT CCAGCACTAC
CCCGAGCTGC CCTGGACCAC GGTGGGCGAC TTCACGGCCA CGGTGCTGGC CGGCGAAGCG
CTGGGCCTGA CGTCGCCGGC CGAGGTGCAC ACGCCCCTGA TGAGCGTGGA CCTGCATGCG
GACAGCGCGG GCAATGGCAA TGCCGTCGCC ACGCTGCCGC TGCGTGCCGA TTTCGAGCAT
GCCGTGCTCA GCCTGGAAGG AAGCGTGAGC GTGAACGGCC AGCCCCTGCC GGTGGAGGAA
CTGCTCTACC TGCCCCTGGG CACGGCCTCG GTCGCCATCG AGACCACGCC CGGCAGCCGC
CTGCTGGTCA TTGGCGGCGA GCCAATGGAT GAAGCCATCT TGCTGTGGTG GAACTTCGTG
GCCCGCACCA GCGAAGAGAT CGCCGAGGCC CGCGCGAAAT GGGAAGCGGA GGCCGGTCAG
GATGCGCAGG CCCTGCCCGC AGGTGCGGCA CGCCGCTTCG GGCCGCCGCT GGCATCGCCC
CTGAAGCCGC TGCATGCGCC TTCGCTGGAC GGCGTGGTGC TGCGCGCCTC GCGCTGA
 
Protein sequence
MPAAPRCTTL VASPTKQADP TMSDTSQPHS QPQHLPTRTA DVGGIPIQRA IPQRALRKVG 
AWCFLDHAGP ADPAPPGMQV GPHPHIGLQT FTWMIRGEVL HRDSLGHTQI IRPGQVNLMT
AGHGIAHSEE SQTPSHIHAA QLWIALPESH RNGPPRFQHY PELPWTTVGD FTATVLAGEA
LGLTSPAEVH TPLMSVDLHA DSAGNGNAVA TLPLRADFEH AVLSLEGSVS VNGQPLPVEE
LLYLPLGTAS VAIETTPGSR LLVIGGEPMD EAILLWWNFV ARTSEEIAEA RAKWEAEAGQ
DAQALPAGAA RRFGPPLASP LKPLHAPSLD GVVLRASR