Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0895 |
Symbol | |
ID | 5746449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 1007445 |
End bp | 1008722 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641295975 |
Product | exonuclease subunit SbcD |
Protein accession | YP_001561926 |
Protein GI | 160896344 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTC TTCACACTTC CGACTGGCAC CTGGGCCAGC ACTTCATGGG CAAGAGCCGC CAGGCCGAGC ACGCTGCGCT CATCGACTGG CTGCTGGAGC AGGTCGATGC CCAGGCGGTC GATGCCGTGC TCATCGCGGG CGATATCTTC GACACCGGCG CGCCGCCCAG CTATGCGCGC GAGCTGTACA GCCAGCTGGT GGTGCGCCTG CATGCGGCGG GCGTGGCCCT GTTGCTGCTG GGCGGCAACC ACGACTCCGT GGCCACGCTG GCAGAGAACC GCGAGCTGCT GGCCTGCCTG GACACCACCG TGGTTGCCGC CGTGGGCGAG ACGGCCAGCC ACGTGGTCGA GCTGCCGCTG CGGCGCCGGC CGGGGCAGCC GGCCGCGCCC GGCTGCATCG TCTGCGCCCT GCCCTTCATG CGCCCGCGCG ACCTGGTGCT GAGCCAGCCC GGCCAAAGCG CCGAGCAAAA GCAGCAGGCG CTGCAAGCCG CCATCGAGTC CTGTTACCGC AGCGTGCACG ACGCCGCCAT GGCACGCCGT GACGCGCTGG CCGCCGCATC CGGCCAGCGC CTGCCCATCA TCGCCACAGG CCATCTCACC ACCGTGGGCG CCAGCAGCAG CGAGTCCGTG CGCGAGATCT ACGTGGGATC GCTGGACGCC TTCCCCACCT CGGCCTTTCC GCCCGCCGAC TACGTGGCGC TGGGCCACAT CCACCAGCCG CAGAAAGTGG GCGGCCTGGA GCACATCCGC TACAGCGGCT CGCCCATTGC GCTGAGCTTT GACGAGGCCC GCCAGTCCAA GCAGATGCTG CTGGTGGACC TGGGCCCCGA AGGGCTGCAG GCCGTCACGC CGCTGCCCGT TCCCTGCTTT CAGCCCATGG CCTCGGTGGC AGGCAGCCTG ACCGCCTTGC CGGATCTGAT GCGCGCCGCC GCCCAGGCCG GCAGCCCTGC ACGGTCCGTA TGGTTGGAGG TGGTGGTGGA GCAGGACGAC TACCTGCCCC AGCTCACCGA CCGCGTGCAG GCCCTGGCCG ACGAGCTGCC CGTGGAACTG CTGCGCGTGC GGCGCCAGCG CGGCCGGGCG GTGGCCGGCA TGGCCGCCGC CGCCGGCGAG TCGCTGCACG AGATCAGCCC CGCCGACGTC TTCGAGCGCC GCCTGGCGCT GGAAACACTG GAGCCCGGCC TGGCCCAGGC CCTCACCCGG CGCTACCAGG AAGTGGTGGC CGGGCTCGAT GCGCCCCAGC CAGGCGCCGG CGAACACGGC GAGGAGGCCC GCGCATGA
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Protein sequence | MRLLHTSDWH LGQHFMGKSR QAEHAALIDW LLEQVDAQAV DAVLIAGDIF DTGAPPSYAR ELYSQLVVRL HAAGVALLLL GGNHDSVATL AENRELLACL DTTVVAAVGE TASHVVELPL RRRPGQPAAP GCIVCALPFM RPRDLVLSQP GQSAEQKQQA LQAAIESCYR SVHDAAMARR DALAAASGQR LPIIATGHLT TVGASSSESV REIYVGSLDA FPTSAFPPAD YVALGHIHQP QKVGGLEHIR YSGSPIALSF DEARQSKQML LVDLGPEGLQ AVTPLPVPCF QPMASVAGSL TALPDLMRAA AQAGSPARSV WLEVVVEQDD YLPQLTDRVQ ALADELPVEL LRVRRQRGRA VAGMAAAAGE SLHEISPADV FERRLALETL EPGLAQALTR RYQEVVAGLD APQPGAGEHG EEARA
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