Gene Daci_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0891 
Symbol 
ID5746445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1001954 
End bp1002412 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID641295971 
ProductRDD domain-containing protein 
Protein accessionYP_001561922 
Protein GI160896340 
COG category[S] Function unknown 
COG ID[COG1714] Predicted membrane protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.98299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATG ACGATCTCGA ATACGTGGGC TTCTGGGCCC GCACCGGCGC CGCGCTGATC 
GACACCGTGA TCCTGCTCGT GCTCATGCTT CCGGCCCTGA TCTCCATCTA TGGCTGGGAA
TACCTGGAGT CCGAAAAACT GCTGCACGGC CCGGCCGATT TCGTCATCTC CTGGGTGCTG
CCTGCCATTG CCGTCGTCAT CTTCTGGATC AAGAAACAGG CCACGCCGGG CAAGATGCTC
ATCGCCGCCA GGATCGTGGA CGCGCAGACC GGCGCGGACA TGAGCACACG GCAGGCCATC
ATTCGCTACC TGGCCTATTT CGTGTCCATC ATCCCGCTGT GCCTGGGGCT GATCTGGGTG
GCCTTTGACC CGCGCAAGCA GGGTTGGCAC GACAAGATTG CGGGCACCGT GGTGGTCAGG
CCCAAGCACC GGGGCGTGCA GCCGGTGAAG TTCCGCTGA
 
Protein sequence
MQDDDLEYVG FWARTGAALI DTVILLVLML PALISIYGWE YLESEKLLHG PADFVISWVL 
PAIAVVIFWI KKQATPGKML IAARIVDAQT GADMSTRQAI IRYLAYFVSI IPLCLGLIWV
AFDPRKQGWH DKIAGTVVVR PKHRGVQPVK FR