Gene Daci_0877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0877 
Symbol 
ID5746431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp983563 
End bp985065 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content70% 
IMG OID641295957 
Producthistidine kinase 
Protein accessionYP_001561908 
Protein GI160896326 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.43922 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCT TCCAGCGTGA ACAGCGCTCA CTGTTCGGCG AGATCCTTGA CTGGATGCTC 
ACGCCGCTGC TGCTGCTGTG GCCCGTGAGC CTGGCGCTGA CCTGGCTGGT GGCCCAGGGC
CTGGCCAACA AGCCGTTCGA TCGCGCGCTG GAGTACAACG CCCAGGCGCT GGCGCAGCTG
GTGATGGTGC AGCAGGGCAA GGTGCTGTTC AACCTGCCGC AATCGGCCAG CGAGATCCTG
CGCGCCGACG AGTCGGACAC CGTGTATTTC CAGGTGCTGG GCGTCAAGGG CGAGTACCTG
GCCGGCGAGC GCGATCTGCC GCTGCCGCCC GAGTCCGACG ATCCGCCATC CGGCGATCTG
TCGCCCGGCG TTGCGCCGAC CGGCGGGGCC GTGCAGCTGC GCGATGCGGA GTTTCGCGGC
ATTGACCTGC GCGTGGCCCA TGTCTGGGTG CGCATGCCCC TGCCCGACGA GCCCCAGGCC
CTGGTCCAGG TGGCCGAGAC GCGCGAAAAG CGCAGCGTGC TGGCCACGGA AATCATCAAG
GGCGTGATGC TGCCGCAGTT CGTCATCCTG CCCCTGGCCG CCTTGCTGGT GTGGCTGGCG
CTGGCGCGCG GCATCAAGCC GCTGCACCGG CTGGAGGAGC GCATCCGCGC GCGCCGGCCC
GAGGACCTCT CGCCCATCAA CCACAAGGAC GTGCCGCTGG AAGTCGTGCC GCTGGTGGAC
TCCGTCAACG ACCTGCTGGG CCGGCTCGGT GATTCGCTGG CCACGCAAAA GCGCTTTCTG
GCCGACGCGG CCCACCAGCT CAAGACACCG CTGGCCGGGC TGCGCATGCA GGCCGAACTG
GCCCAGCGCG AGGGCGTGAG CACGGAGGAG TTGCGGCAGT CACTGGCCCA GATCGCGCGC
TCCAGCATCC GCGCCACGCA CACGGTGAAC CAGTTGCTGG CGCTGGCGCG CGCCGAGAGC
GCCGGCGTGG GCCGCGGCCT GGCCATGCAG CCCTGCAACT TGGTGCGCAT CGTCACCGAC
GTGGTGCGCG ACTGCCTGCC GCGCGCCATG GACAAGCATG TGGACCTGGG ATACGACGGC
GCCGAGTCAT CGGCCACCGG CGTCTGGCTG CAGGGCAATG CCACGCTGCT GACGGAGCTG
GTGCGCAACC TCGTGGACAA CGCCATCAAC TACACGCCTT CCAGCAGCAG CCGGCCCGGC
ATGGTCACGG TGCGCGTGCT GGCCGATCCC TTCGGCCAGG TTTTGTTGCT GCAGGTGGAG
GATTCGGGGC CCGGCGTGCC CGAGGCCGAG CGCGAGCTGG TGTTCCAGCC GTTCTACCGC
GTGCTGGGCT CGGAGGCCGA TGGCTCGGGC CTGGGCCTGC CCATCGTGCT GGAGATCGCG
CGCCAGCATG GCGCCCAGGT GGTGCTGGAA GATGCGCATC CTGGCCAGCA GCCGCCGGGT
GCGCGTTTCA GCGTGCGCTT CAAGGCGCTG CGCTCGCCGC CGTCGCCCAA GCCTGCGGCG
TAG
 
Protein sequence
MKIFQREQRS LFGEILDWML TPLLLLWPVS LALTWLVAQG LANKPFDRAL EYNAQALAQL 
VMVQQGKVLF NLPQSASEIL RADESDTVYF QVLGVKGEYL AGERDLPLPP ESDDPPSGDL
SPGVAPTGGA VQLRDAEFRG IDLRVAHVWV RMPLPDEPQA LVQVAETREK RSVLATEIIK
GVMLPQFVIL PLAALLVWLA LARGIKPLHR LEERIRARRP EDLSPINHKD VPLEVVPLVD
SVNDLLGRLG DSLATQKRFL ADAAHQLKTP LAGLRMQAEL AQREGVSTEE LRQSLAQIAR
SSIRATHTVN QLLALARAES AGVGRGLAMQ PCNLVRIVTD VVRDCLPRAM DKHVDLGYDG
AESSATGVWL QGNATLLTEL VRNLVDNAIN YTPSSSSRPG MVTVRVLADP FGQVLLLQVE
DSGPGVPEAE RELVFQPFYR VLGSEADGSG LGLPIVLEIA RQHGAQVVLE DAHPGQQPPG
ARFSVRFKAL RSPPSPKPAA