Gene Daci_0869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0869 
SymbolsucC 
ID5746423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp974912 
End bp976072 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content62% 
IMG OID641295949 
Productsuccinyl-CoA synthetase subunit beta 
Protein accessionYP_001561900 
Protein GI160896318 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC ATGAATACCA AGGCAAGGAC ATCTTGCGTC AGTTTGGTGT GCCTGTACCT 
CGCGGTATCC CTGCGTTCAC AGTGCAAGAG GCCGTCGAGG CCGCCCAGAA GCTCGGCGGC
CCCGTGTGGG TCGTGAAGGC CCAGATCCAC GCTGGTGGTC GCGGCAAGGG CGGCGGCGTG
AAGGTTGCCA AGAGCATTGA CGACGTCAAG GCACTGGCTG GCCAGATCCT GGGCATGCAG
CTGGTCACGC ACCAGACCGG CCCCGAAGGC CAGAAGGTCC GCCGCCTGTA CATCGAAGAC
GGCGCCGACA TCCAGAAGGA ATACTACCTG TCGTGCGTGA CCGATCGCGG CACGCAGAAG
GTGGCCTTCA TCGCTTCCAG CGAAGGCGGC ATGGACATCG AGGAAGTGGC CCACTCCACT
CCCGAGAAGA TCATCACCAT CTTCGTTGAC CCCCTGGTCG GCCTGACCCA GGCCCAGGGC
GAAGAACTGG CCAAGGGCAT CGGCATGCCT GCCGACTCCA CCGCCCAGTT CATCGACATC
TGCCAGAAGC TCTACAAGTG CTACATGGAC ACGGATGCCT CGCTGGTCGA GATCAACCCG
CTGAACCGTG ACAGCAAGGG CAACGTGGTT GCCCTGGACG CGAAGTTCAA CTTCGACGCC
AACGCCCTGT TCCGCCTGCC CGAAATCGTG GCACTGCGCG ACCTGGACGA AGAAGATCCC
GCTGAAGTCG AAGCCTCCAA GTTCGATCTG GCCTACATCT CGCTGGACGG CAACATCGGC
TGCCTGGTCA ACGGTGCAGG TCTGGCCATG GCCACCATGG ACACCATCAA GCTGTTCGGC
GGCGAGCCGG CCAACTTCCT GGACGTGGGC GGCGGTGCCA CCCCCGAGAA GGTCACCGAA
GCCTTCAAGA TCATGCTCAA GAACCCCAAG GTCGAAGGCA TTCTGGTCAA CATCTTCGGC
GGCATCATGA AGTGCGACAC CATCGCCACC GGCGTGATCA CTGCCTGCAA GGCCGTGAAC
CTGCAAGTGC CCCTGGTCGT GCGCATGAAG GGCACGAACG AAGAACTGGG CAAGAAGATG
CTGGCCGAGT CCGGCCTGCC CATCATCAGC GCCGACACGA TGGCCGAAGC GGCCACCAAG
ATCGTCGAAG CCGTCAAGTA A
 
Protein sequence
MKIHEYQGKD ILRQFGVPVP RGIPAFTVQE AVEAAQKLGG PVWVVKAQIH AGGRGKGGGV 
KVAKSIDDVK ALAGQILGMQ LVTHQTGPEG QKVRRLYIED GADIQKEYYL SCVTDRGTQK
VAFIASSEGG MDIEEVAHST PEKIITIFVD PLVGLTQAQG EELAKGIGMP ADSTAQFIDI
CQKLYKCYMD TDASLVEINP LNRDSKGNVV ALDAKFNFDA NALFRLPEIV ALRDLDEEDP
AEVEASKFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG GEPANFLDVG GGATPEKVTE
AFKIMLKNPK VEGILVNIFG GIMKCDTIAT GVITACKAVN LQVPLVVRMK GTNEELGKKM
LAESGLPIIS ADTMAEAATK IVEAVK