Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0864 |
Symbol | |
ID | 5746418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 970388 |
End bp | 970879 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641295944 |
Product | pilin |
Protein accession | YP_001561895 |
Protein GI | 160896313 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.484071 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTT CCATCCAGCA AGGTTTTACC TTGATCGAAT TGATGATCGT TGTGGCGATC ATCGGCATTT TGGCAGCCGT TGCGCTGCCG GCTTATCAGG ACTACACAAC CCGCGCCAAG GTTACTGAAG GTCTTTCCCT TGCTGCCGCC GCCAAAGTGG CCGTCGCTGA GAATGCGGCC AATGGCAAGC CCTATAACGC CGGTTGGATG CCTCCTAACG CGACCAATAA CGTTGCTGGT GTAACTATCG ATCAAGCAGC AGGATACATC ACGATCACTT ATCAAACTGG CATCGCCGGC GCTGGCACGC TGATTCTCAA CCCAATTGAT GGCCCCAAGA CTAGCGGCAC TGCATTTTCC GGCGGAACCT CAACCTCCTC GAACATTCCG ACCAGCGGTT CCATCAGCTG GAATTGCCGC GCTGCTGGAT CTACTGGCGT CGGCACAGCC GGCACCATCC AAGCCAAGTA CACACCTGCT GAATGCCGTT AA
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Protein sequence | MKRSIQQGFT LIELMIVVAI IGILAAVALP AYQDYTTRAK VTEGLSLAAA AKVAVAENAA NGKPYNAGWM PPNATNNVAG VTIDQAAGYI TITYQTGIAG AGTLILNPID GPKTSGTAFS GGTSTSSNIP TSGSISWNCR AAGSTGVGTA GTIQAKYTPA ECR
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