Gene Daci_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0852 
Symbol 
ID5746406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp958577 
End bp960022 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content65% 
IMG OID641295932 
Productadenylosuccinate lyase 
Protein accessionYP_001561883 
Protein GI160896301 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.697977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGCC CGGCGATCTC CCCCTACAGC CCCCGTTTTT GCCGCGCGCA CCTACAATCA 
CGGCCCATGA ATCTGCCGCA CATCTCCGCC CTGTCCCCGC TCGACGGCCG CTACGCCGCC
AAACTGTCTC CTCTGCGCCC GATCATGAGC GAGATGGGAT ACATGCACCG CCGCGTGCAG
GTGGAGGTGA CCTGGTTCAT CGCCCTGTCG GACGCCGGCT TTGCCGAGTT CAAGCCCCTG
ACCGAAGGCG CCCGCGTCTA TCTGCAGGAT CTGGTGAAGA ACTTCTCCGA GGCCGATGCC
GTGGCCATCA AGGACATCGA AAAGACCACC AACCACGACG TCAAGGCCGT GGAGTACTGG
ATCAAGGGCA AGTTCGACGG CCGTCCCGAA CTGCTCAAGG CCGCCGAATT CGTGCATTTC
GCCTGCACCA GCGAAGACAT CAACAACACC AGCCATGCGC TGCAACTGCG CGCCGGTCGT
GACAGCGTGC TGCTGCCGGC CTTGGCGGGC ATCACTGCCA AGCTGCGCGA GATGGCCCAC
GCCTACGCGG CCGTGCCCAT GCTCAGCCGC ACGCACGGCC AGACCGCCAG CCCCACCACC
GTGGGCAAGG AAATCGCCAA CGTGCTGGTG CGTCTGGAAA AGGCCGCTGC CCGCATCGCC
GAGGTCAAGC TCCTGGCCAA GATGAATGGC GCCGTCGGCA ACTACAACGC CCATCTGTCG
GCCTGGCCCG AGTTCGACTG GGAAGCCTTC AGCAAGAAGG TGATCGAGTC GCCCGAGCCC
CAGGGCCTGG GCCTGAGCTT CCAGCCCTAC TCGATCCAGA TCGAGCCGCA TGACTACATG
GCCGAGCTGT TCGACGCCAT CGCGCGCGCC AACACCATCC TCATCGACTT CTCGCGCGAT
GTCTGGGGCT ATGTGTCCCT GGGCTACTTC AAGCAGCGCC TGAAGGCCGG CGAGATCGGC
TCGTCCACCA TGCCGCACAA GGTCAACCCC ATCGACTTCG AGAATGCCGA AGGCAATCTG
GGCCTGGCCA ACGCACTGCT CAAGCACCTG GCCGAAAAGC TGCCCATCTC GCGCTGGCAG
CGCGACCTGA CCGACTCCAC CGTGCTGCGC AACATCGGCG TGGCCATGGG CTATGCCACG
CTGGCCTACA GCTCGCTGAT GACGGGCCTG AACAAGCTCG AACTCAACGA AGAGCGCCTG
CAGGAAGACC TGGATCACGC CTGGGAAGTC CTGGCCGAGC CCATCCAGAC CGTCATGCGC
CGCTACGGCG TGCAGGGCGC CTACGAAAAG CTCAAGGAAG TCACGCGCGG CAAGACCGTG
CAGGCCGAAG ACCTGCACCG CCTGATCAAC GGCCTGGAAA TCCCCCAGGC CGACAAGGAC
CGCCTGCTGG CCATGACGCC TGCCTCCTAT GTGGGCAAGG CGGCCGAGCT GGCCCGCCGC
GTCTGA
 
Protein sequence
MRCPAISPYS PRFCRAHLQS RPMNLPHISA LSPLDGRYAA KLSPLRPIMS EMGYMHRRVQ 
VEVTWFIALS DAGFAEFKPL TEGARVYLQD LVKNFSEADA VAIKDIEKTT NHDVKAVEYW
IKGKFDGRPE LLKAAEFVHF ACTSEDINNT SHALQLRAGR DSVLLPALAG ITAKLREMAH
AYAAVPMLSR THGQTASPTT VGKEIANVLV RLEKAAARIA EVKLLAKMNG AVGNYNAHLS
AWPEFDWEAF SKKVIESPEP QGLGLSFQPY SIQIEPHDYM AELFDAIARA NTILIDFSRD
VWGYVSLGYF KQRLKAGEIG SSTMPHKVNP IDFENAEGNL GLANALLKHL AEKLPISRWQ
RDLTDSTVLR NIGVAMGYAT LAYSSLMTGL NKLELNEERL QEDLDHAWEV LAEPIQTVMR
RYGVQGAYEK LKEVTRGKTV QAEDLHRLIN GLEIPQADKD RLLAMTPASY VGKAAELARR
V