| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0844 |
|---|
| Symbol | |
|---|
| ID | 5746398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 944844 |
|---|
| End bp | 945578 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641295924 |
|---|
| Product | OmpA/MotB domain-containing protein |
|---|
| Protein accession | YP_001561875 |
|---|
| Protein GI | 160896293 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.73971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAAGC ACATCGTTCT GGCCGCCGCA ACGGCTGCCG CACTGTTCAT CTCCGGCTGC
GCGAACATGA GCGACACCCA GCGCCGCACG GCCACGGGTG CTGGCGTGGG CGCTGCAGCC
GGCGCCGTGC TGGGCGCGGT CACCGGCGGC AGGGCCGGCA CGGGCGCCGT GATCGGTGCC
GGCGTGGGTG CACTGGGCAC CTACATCTGG TCGCAGAACA TGGAAAAGCA AAAGCGCGAG
ATGGAGCAGG CCACCCAGGG CACGGGCGTG AACGTGAGCC AGACGGCCGA CAACCAGCTC
AAGCTCGACA TTCCCAGCGA CATCTCGTTC GATACCAACC GTTCCGACAT CAAGGGCAAC
TTCGCCCCCA TCCTGGACCG CTTCGCTGAA GGCCTGCGCA ACAACCCCAA TGCCGAGGTG
CGCATCATCG GCCACACGGA CAGCACCGGC TCGGACGCCA TCAACAACCC GCTGTCGCTG
GACCGCGCCA ACAGCACGCG CAACTACCTG ACCATGCGCG GCGTCTCGGG CGCTCGCATC
GCCACCGAAG GCCGTGGCTC GCACCAGCCC GTGGCTTCCA ACGACTCGGC CAGCGGCCGT
GCCATGAACC GCCGCGTGGA AATCTTCGTG GGTGAGATCC CGCAGCAGCA CCAGCAGCAG
CAGCAGCCCC AGTATCAACA GCAGCCGCAG TACCAGCAGC CGCAATACCA GCCCCAGTAC
CAGCAGCCCC GCTGA
|
|---|
| Protein sequence | MRKHIVLAAA TAAALFISGC ANMSDTQRRT ATGAGVGAAA GAVLGAVTGG RAGTGAVIGA
GVGALGTYIW SQNMEKQKRE MEQATQGTGV NVSQTADNQL KLDIPSDISF DTNRSDIKGN
FAPILDRFAE GLRNNPNAEV RIIGHTDSTG SDAINNPLSL DRANSTRNYL TMRGVSGARI
ATEGRGSHQP VASNDSASGR AMNRRVEIFV GEIPQQHQQQ QQPQYQQQPQ YQQPQYQPQY
QQPR
|
|---|
| |