Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0804 |
Symbol | mnmA |
ID | 5746358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 894920 |
End bp | 896038 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641295884 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001561835 |
Protein GI | 160896253 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAAC ACCGCGTCGT GGTGGGCCTG TCGGGCGGTG TGGACTCCGC TGTCACGGCC CATCTCCTCA AGCAACAGGG CCATGAAGTG GTCGGCATCT TCATGAAGAA CTGGGAAGAT GACGACGACA GCGAATACTG CTCGTCCAAT GTCGATTTCG TCGATGCCGC CGCCGTGGCC GACGTGGTCG GCATCGAGAT CGAGCATGTG AACTTCGCCT CCGAGTACAA GGACCGCGTC TTCGCCGAGT TCCTGCGCGA GTACCAGGCC GGCCGCACGC CCAACCCCGA CGTGCTGTGC AATGCCGAGA TCAAGTTCAA GGCCTTCCTG GACCACGCCA TGCGCCTGGG CGCCGAGAAG ATCGCCACGG GCCACTACGC CCGCGTGCGC CAGAACCCCG ACACGCAGCT GTTCGAGCTG CTCAAGGGGC TGGACCCGGC CAAGGACCAG AGCTACTTCC TGCACCGCCT CAACCAGGCT CAGCTGTCCA GGTCCATGTT CCCCGTGGGC GAGCTGAAGA AGACCGAGGT GCGCCGCATT GCCGAGGAGA TCGGCCTGCC CAACGCGAAG AAGAAGGACT CCACGGGCAT CTGCTTCATC GGAGAGCGGC CGTTCCGCGA CTTCCTGAAC CGCTACATCA GCAAGGAGCC CGGCAACATC CTCGACGACC GCAACCGCAA GCTGGGCAAG CATGTGGGCC TGTCGTTCTA CACGCTGGGC CAGCGCTCGG GCCTGGGCAT CGGCGGCGTC AAGGAAAAGG GCGCGCCGCG CGGCGGCGGC GACCATGATC CCTGGTTCGT GGCGCGCAAG GAGCTGGACA CCAACACGCT GCGCGTGGTG CAGGGCCATG ACCACCCCTG GCTGCTGTCG CAGTCGCTGC TGGCCGACCA GGTCAGCTGG GTGGCCGGCC ACGCGCCCGC CGAGGGCAAG GCCTACGGCT CCAAGACGCG CTACCGCCAG CCCGACTCGC CGGCCCTGAT CTCGGGCGCC ACGCCCGAGG GCTTCCGGCT GGATTTTCCC GAGCCGCAAT GGGCCGTCAC GCCCGGCCAG TCGGCCGTGC TCTACGACGG CGACGTGTGC CTGGGCGGCG GCATCATCGC GGCGGTGGAT CCGCACTGA
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Protein sequence | MTKHRVVVGL SGGVDSAVTA HLLKQQGHEV VGIFMKNWED DDDSEYCSSN VDFVDAAAVA DVVGIEIEHV NFASEYKDRV FAEFLREYQA GRTPNPDVLC NAEIKFKAFL DHAMRLGAEK IATGHYARVR QNPDTQLFEL LKGLDPAKDQ SYFLHRLNQA QLSRSMFPVG ELKKTEVRRI AEEIGLPNAK KKDSTGICFI GERPFRDFLN RYISKEPGNI LDDRNRKLGK HVGLSFYTLG QRSGLGIGGV KEKGAPRGGG DHDPWFVARK ELDTNTLRVV QGHDHPWLLS QSLLADQVSW VAGHAPAEGK AYGSKTRYRQ PDSPALISGA TPEGFRLDFP EPQWAVTPGQ SAVLYDGDVC LGGGIIAAVD PH
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