Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0800 |
Symbol | |
ID | 5746354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 890864 |
End bp | 892039 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641295880 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001561831 |
Protein GI | 160896249 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCCA TGCAACAAAC CCATGGATTG TCCAGCGCCC TCGACGGCCT GCGCGTGGTG GACCTGTCCC GCATCCTGGC GGGACCCTGG TGCACCCAGA ACCTTGCCGA CCTGGGCGCA TCGGTGCTCA AGATCGAGCG TCCCGGCACG GGCGACGACA CGCGCGCCTG GGGCCCGCCC TTCGTGCAGG CGCCCGGTGG CGAGGCCGTG TCGGCCTACT TCCTGTCCTG CAACCGCGGC AAGCAGTCGG TGGCGCTGGA CTTCACCGAG CCGGCCTCGC ATGCCTGGCT GCTGCGCCAG ATCCGCGATG CCGACGTGCT GGTGGAAAAC TACAAGGCCG GCGCGCTGGC GCGCCACGGG CTGGACTACG CGGCGCTGGC CGCCATCAAC CCGGGGCTGA TCTACCTGTC GATCACGGGC TTCGGCCAGA GCGGCCCTTT TGCGCACAAG CCCGGCTACG ACTATGTGTT CCAGGGGCTG GGCGGCCTCA TGGGCTACAC GGGCGTGGCC GATGGCGAGG AGGGCGCGGG CCCGTTGCGC ACGGGCGTGG CCGTGGTGGA CCTGATGACG GGCATGTATG CCACCAGCGC CGTGCTGGCG GCCGTGGTGC AGCGCCAGCG CACGGGGCGC GGCCAGCACA TCGACCTGGC GCTGCTGGAC GTGGCCGTGG CCATGAATGC CAACCAGGCG GCCAACTACC TGGTCAGCGG CGAGAACCCG CGCCGCACGG GCAACGCCCA TCCCAATTGC GCGCCCTACG AGGTGTTTGC CTGCGAAGAC GGGCATTTGA TCCTGGCCAT CGGCAATGAC GGGCAGTTCG CCGCCCTGTG CTCCGTGCTG GGCACGGACT GGCACCTGGA CGCGCGCTTT GCCACCAATG CCGCGCGCCT GACCGGCATG GCGCAGCTGC GCCCGCTGTT GCGCGCGGCG CTGGGCCGCT GGCCGCTGCA GGCCCTGACC GATGCGCTGG ACACCGCCCA GGTGCCCTGG GGCTGCATCA ACACCCTGGA ACAGGTCTTC GCCCATCCGC AGGTACGGCA CCGCCAGATG CTGCAGACGG TGGAGCACCC GCAGCTGGGC ACGCTGAAGC TGGTGCGCAA CCCCATGGTG CCGGCCGGCA GCGGCGCCCA GGTGCCGCCA CCGCCCGTGC TCGGTGCGGC GCCGCAGGAC CTCTGA
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Protein sequence | MESMQQTHGL SSALDGLRVV DLSRILAGPW CTQNLADLGA SVLKIERPGT GDDTRAWGPP FVQAPGGEAV SAYFLSCNRG KQSVALDFTE PASHAWLLRQ IRDADVLVEN YKAGALARHG LDYAALAAIN PGLIYLSITG FGQSGPFAHK PGYDYVFQGL GGLMGYTGVA DGEEGAGPLR TGVAVVDLMT GMYATSAVLA AVVQRQRTGR GQHIDLALLD VAVAMNANQA ANYLVSGENP RRTGNAHPNC APYEVFACED GHLILAIGND GQFAALCSVL GTDWHLDARF ATNAARLTGM AQLRPLLRAA LGRWPLQALT DALDTAQVPW GCINTLEQVF AHPQVRHRQM LQTVEHPQLG TLKLVRNPMV PAGSGAQVPP PPVLGAAPQD L
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