| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0731 |
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| Symbol | |
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| ID | 5746285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 808310 |
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| End bp | 809296 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641295811 |
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| Product | TRAP dicarboxylate transporter, DctP subunit |
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| Protein accession | YP_001561762 |
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| Protein GI | 160896180 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA CGCTTTTCCA CCGCGCCGCC CTGGCCGCCT GCGCCCTGCT GCTGCCGGCC
CTGGCCTGTG CCCAGGCCGT CAAGCTCACG CTGGGCCACG GCGCGGCGCC CGACAATCCG
CGCCACCTGG CCTCGCTGAA GTTCGCCGAA CTGGTGAAGA CGCGCAGCGC AGGCCGCATC
GAGGTGCAGG TCGCCCCCTC GGCCCAGCTG GGCGACGACG CGGCCATGGT CACGGCCCTG
CGCACGGGCG CGCTGGACCT GTCGGCCAAT TCCCAGGGCG CGGTGGCAGC GGCCGTGCCC
GAGTACGCGG CCTATGGCAT GCCGTTTCTC TTCGCCACGC CGGCCCGTGC CTTCCAGGTG
CTGGACGGGC CGCTGGGCCG GGAGCTGGCC GACAAATCGG CCGCCAAGGG CATGGTGGTA
CTGGGCTACT GGGACAACGG CATACGCCAC ATGACCAACA GCAAGCGGCC CCTGCGCAGC
GTGGACGATC TCAAGGGCCT GAAGATGCGC ACGCCGCCCG ACGCGGTGCT GGTGGACATC
ATCCAGGCCC TGGGCGCCGA GGCCCAGCAG ATCAAGTTCG CCGAGCTGTA CGTGGCCCTG
CAGCAGGGCG TGGTCGATGG CCAGGAGAAC CCGCTGGCCA ACTTCCACGC CAGCAAGCTG
TACGAGGTGC AAAAGCACCT GACGCTGACG GGCCACATGT TCCAGATGAC GCCGCTGATC
ATGGGCAAGC GCAGCTGGGA CCGGCTGCCG GCCGCCGACC GCACGCTGCT GACCGAGGCC
GCGCAGGAGG CCACGGCCTA CCAGCGCCAG CTGGCGCGCG AGGCCGACGA CAGGCTGCTG
GACGACATCC GCGCCAAGGG CGTGGAGGTG AGCACCATCG ACGCGCGGGC CTTCGCCCAG
GCCACGGCCA AGGTGCAGGA CAAGTGGCTG GCCAGCCCTG CGGGCCCCTA TATCGCCAAG
GTCGTCAAGG CCGCAGGCGC GCAGTGA
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| Protein sequence | MQSTLFHRAA LAACALLLPA LACAQAVKLT LGHGAAPDNP RHLASLKFAE LVKTRSAGRI
EVQVAPSAQL GDDAAMVTAL RTGALDLSAN SQGAVAAAVP EYAAYGMPFL FATPARAFQV
LDGPLGRELA DKSAAKGMVV LGYWDNGIRH MTNSKRPLRS VDDLKGLKMR TPPDAVLVDI
IQALGAEAQQ IKFAELYVAL QQGVVDGQEN PLANFHASKL YEVQKHLTLT GHMFQMTPLI
MGKRSWDRLP AADRTLLTEA AQEATAYQRQ LAREADDRLL DDIRAKGVEV STIDARAFAQ
ATAKVQDKWL ASPAGPYIAK VVKAAGAQ
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