Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0712 |
Symbol | |
ID | 5746266 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 787275 |
End bp | 788174 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641295792 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001561743 |
Protein GI | 160896161 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATCT CCTCCCGCCA GCTCGATGCC TTCATCGCCC TGGCCCAGCT CAGCAGCTTC ACCCTGGCCG CGCAGCGCTG CCATCTGTCG CAGCCGGCCT TCAGCGCCCT GATCAAGGGC CTGGAAGACG GCGTGGGCGT GCGCCTGTTC GACCGCAGCA CGCGCCATGT GGCGCTGACG CAGGAGGGGG CGCAGTTCCT CGATGCCGCG CAGCGCATAC GCGCCGACCT GGGCGATGCC GTGCACGGCC TGCGCGAGGC GGCGGCGCTG CAGCGCGGGC GCGTGTCCAT CGCCCTGCTG CCTTCGCTGG CGGCAGCCTG GCTGCCGCCC GTGCTGGCGC TGTTCCATGC GCGCCATCCG GGCATACAGC TGCAGGTGTC GGACCTGCTG TCCGAATCGT GCATCGCCCA GGTGGCCTCG GGCCAGGCCG ACCTGGCGCT GGCCGCCATC CGCGCCGACA CCGAGGAGCT GCAGGCCGAA TGGTTCTGCG CCGACCGGCT GCACCTGGTC TGCCGCGCCG ACCATGCGCT GGCGGCCCTG CCCGCGCCGG CCATGGCCGA CCTGCGGGAC CAGCCCTTCA TCCAGCTCGC CCGCCACAGC AGCGTTCGCC AGTACCTGGA ATCGCAGGAG CAGGCCCCGC CCCTCAACAC CTTGCTGGAA GTGGAGCACC TGGCCACCGT GATGGGCATG GTGCGCGCGG GCATGGGCAT CAGCGTGGTG CCGGCCCTGG CGCTGTTCCA CTTCGTGCAG CCTGGCCTGG TGACGCGCCC GCTGGCCGAT GCCGACCGCC GGCGCGACCT GTACCTGGTG CGCAGGCGCC AGCGCAGCCT GTCGCCGGCC GCCCAGGCCT TCCACGCGCT GGCGCTGGAG CATCGGCCCG GTGCGGGCGA GACCACCTGA
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Protein sequence | MNISSRQLDA FIALAQLSSF TLAAQRCHLS QPAFSALIKG LEDGVGVRLF DRSTRHVALT QEGAQFLDAA QRIRADLGDA VHGLREAAAL QRGRVSIALL PSLAAAWLPP VLALFHARHP GIQLQVSDLL SESCIAQVAS GQADLALAAI RADTEELQAE WFCADRLHLV CRADHALAAL PAPAMADLRD QPFIQLARHS SVRQYLESQE QAPPLNTLLE VEHLATVMGM VRAGMGISVV PALALFHFVQ PGLVTRPLAD ADRRRDLYLV RRRQRSLSPA AQAFHALALE HRPGAGETT
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