Gene Daci_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0687 
Symbol 
ID5746241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp761274 
End bp763658 
Gene Length2385 bp 
Protein Length794 aa 
Translation table11 
GC content71% 
IMG OID641295767 
Productferredoxin 
Protein accessionYP_001561718 
Protein GI160896136 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCT CCGCCGCCCC CGACACCGCC CCGTCCGCCT CTGCGCCAGC ATTTGCGCCC 
GCCTCCGCGC GCTGCCCCTT CGACCACCGC CAGCCCAGCG GCCAGACCGG CCCCACGGGC
TGCCCCGTCA GCGCGGGTGC CGCGGCCTTC GACCCGTTCA GCGACGGCTA CCAGCAGGAC
CCGCCCGAAT ATGTGCGCTG GGCGCGCGAG CAGGAGCCGG TGTTCTACAG CCCGCAACTG
GGCTACTGGG TGGTCACGCG CTTCGACGAC ATCAAGGCGG TGTTCCGCGA CAACATCGCC
TTCAGTCCCT CGATCGCGCT GGAGAAGATC ACGCCCACGG GCGAGGAGGC CAATGCCGTG
CTGGCCTCCT ACGGCTTCGC GCTGAACCGC ACCCTGGTCA ACGAGGACGA GCCCGCCCAC
ATGCCGCGCC GCCGCGCGCT GATGGACCCG TTCACGCCCG AGGAGCTGCG CCACCACGAG
CCCATGGTGC GCGAGCTGGC GCGCGCCTAT GTGGACCGCT TCATCGACGA CGGCCGCGCC
GACCTCGTGG ACCAGATGCT GTGGGAGGTG CCGCTGACAG TGGCCCTGCA CTTTCTCGGC
GTGCCCGAGG AGGACATGGA CAGGCTGCGC GAGTACTCCA TCGCCCACAC CGTCAACACC
TGGGGCCGGC CCCGGCCCGA GCAGCAGGTG GCCGTGGCCC ATGCGGTGGG CAACTTCTGG
CAGCTGGCCG GCAAGGTGCT GGCCAAGATG CGCGAGAACC CCGATGCGCC GGGCTGGATG
CAATACGGCA TACGCAAGCA AAAGGAGCTT CCCGAGGTCG TCACCGACTC CTACCTGCAC
TCCATGATGA TGGCCGGCAT CGTGGCCGCG CACGAGACCA CGGCCAATGC CACGGCCAAC
GCCGTCAAGC TGCTGCTGCA GCATCCCGGC GCCTGGAAGC AGATCTGCGA GAACCCCGCG
CTGATCCCCA ATGCCGTGGA GGAATGCCTG CGCCACAACG GCTCGGTGGC CGCCTGGCGG
CGCCTGGCCA CGCGCGACGT GGTGATCGGC GGCGTGGCCG TGCCGGCGGG CTCGAAGCTG
CTCATCGTGA CCTCGTCGGC CAACCACGAC GAGCGGCATT TCGCCGATGC CGACTTCTTC
GACATCCACC GCGACAACGC CGGCGACCAC CTGACCTTCG GCTATGGCTC GCACCAGTGC
ATGGGCAAGA ACCTGGCGCG CATGGAGATG CAGATCTTCC TGGAGGAGTT CACGCGCCGC
CTGCCCCACA TGCGGCTGGC CGAGCAGCGG TTCACCTACG TGCCCAACAC CTCGTTCCGG
GGTCCCGAGC ACCTGTGGGT GGAGTGGGAC CCGGCCCTCA ACCCCGAGCG CGCCCGTCCC
GCCCTGCTGC AGGCGCGCCA GCCCGTGCGC ATCGGCGAAG CCCTGCAGGG CGGCGCCAGC
CGGCCCATGG TCGTGGCCGA GGCCGAGGCC GCCGCCGAAG GCGTGCTGCG CCTGCGCCTG
AAGGCCGCCG ATGGACACGC CCTGCCGCGC TGGACGCCGG GCTCGCACAT CGACCTGCAA
TGCGGCGACA CGGGCCTGTC ACGCCAGTAC TCGCTGTGCG GCGACCCGCA GGACACCGGC
AGCTACGAGA TTGCCGTGCT GCGCGAGGCC AACGGCCGTG GCGGCTCGGC CTGGGTGCAT
GAGCATCTGC ACCGCGGCGC CACCGTACAG GTGCGGGGCC CGCGCAACCA TTTCCCGCTG
GACGAAGGCG CCAGCCACCT GATCCTGGTG GCCGGCGGCA TCGGCATCAC GCCCATCTCG
GCCATGGCAC GGCGCGCCAG GGCGCTGGGC CTGTCCTATG AAATCCACTA CAGCGGCCGG
CGCCGCGCGG GCATGGCGCT GCTGGCGCCG CTGCTGGCCG AGCATGGCGC CAGGCTGCAT
CTGTACGTGG CGGAGGAAGG CCGGCGCGCC GACTACGCCG CCCTGCTGGC CACGCCGCGC
GCCGGAGCCC GCATCCATGC CTGCGGACCG GCGCGCCTGC TGGACGGCCT GGAGGCCGCC
AGCCGCCACT GGCCCGAGGA CAGCCTGCGC GTGGAGCATT TCGTCTCCAC CGTGGGGGCG
CTGGACCCTG CCAGGGAGCA GGGCTTCGAG GTGGAACTGC GCGCCTCGGG CCTTGTGCTG
CAGGTGCGCA ACGACCAGAC GCTGCTGGAC GCCCTGCGCA GCGCGAAGAT CGAAGTGCAA
AGCGACTGCC GGGAAGGGCT GTGCGGGTCC TGCGAAGTGC CCGTGCTCGA AGGCGAGGTG
GACCACCGCG ACATGGTGCT CACGCGCGGC GAGCGCGCGG CCTGCACCAA GATGATGAGC
TGCTGCTCGC GCGCCAGGAG CGGCAGGCTG GTGCTGGGCC TGTAG
 
Protein sequence
MTASAAPDTA PSASAPAFAP ASARCPFDHR QPSGQTGPTG CPVSAGAAAF DPFSDGYQQD 
PPEYVRWARE QEPVFYSPQL GYWVVTRFDD IKAVFRDNIA FSPSIALEKI TPTGEEANAV
LASYGFALNR TLVNEDEPAH MPRRRALMDP FTPEELRHHE PMVRELARAY VDRFIDDGRA
DLVDQMLWEV PLTVALHFLG VPEEDMDRLR EYSIAHTVNT WGRPRPEQQV AVAHAVGNFW
QLAGKVLAKM RENPDAPGWM QYGIRKQKEL PEVVTDSYLH SMMMAGIVAA HETTANATAN
AVKLLLQHPG AWKQICENPA LIPNAVEECL RHNGSVAAWR RLATRDVVIG GVAVPAGSKL
LIVTSSANHD ERHFADADFF DIHRDNAGDH LTFGYGSHQC MGKNLARMEM QIFLEEFTRR
LPHMRLAEQR FTYVPNTSFR GPEHLWVEWD PALNPERARP ALLQARQPVR IGEALQGGAS
RPMVVAEAEA AAEGVLRLRL KAADGHALPR WTPGSHIDLQ CGDTGLSRQY SLCGDPQDTG
SYEIAVLREA NGRGGSAWVH EHLHRGATVQ VRGPRNHFPL DEGASHLILV AGGIGITPIS
AMARRARALG LSYEIHYSGR RRAGMALLAP LLAEHGARLH LYVAEEGRRA DYAALLATPR
AGARIHACGP ARLLDGLEAA SRHWPEDSLR VEHFVSTVGA LDPAREQGFE VELRASGLVL
QVRNDQTLLD ALRSAKIEVQ SDCREGLCGS CEVPVLEGEV DHRDMVLTRG ERAACTKMMS
CCSRARSGRL VLGL